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Comparative Annotation Toolkit (CAT)-simultaneous clade and personal genome annotation.
Fiddes IT, Armstrong J, Diekhans M, Nachtweide S, Kronenberg ZN, Underwood JG, Gordon D, Earl D, Keane T, Eichler EE, Haussler D, Stanke M, Paten B. Fiddes IT, et al. Among authors: eichler ee. Genome Res. 2018 Jul;28(7):1029-1038. doi: 10.1101/gr.233460.117. Epub 2018 Jun 8. Genome Res. 2018. PMID: 29884752 Free PMC article.
Hotspots of mammalian chromosomal evolution.
Bailey JA, Baertsch R, Kent WJ, Haussler D, Eichler EE. Bailey JA, et al. Among authors: eichler ee. Genome Biol. 2004;5(4):R23. doi: 10.1186/gb-2004-5-4-r23. Epub 2004 Mar 8. Genome Biol. 2004. PMID: 15059256 Free PMC article.
The structure and evolution of centromeric transition regions within the human genome.
She X, Horvath JE, Jiang Z, Liu G, Furey TS, Christ L, Clark R, Graves T, Gulden CL, Alkan C, Bailey JA, Sahinalp C, Rocchi M, Haussler D, Wilson RK, Miller W, Schwartz S, Eichler EE. She X, et al. Among authors: eichler ee. Nature. 2004 Aug 19;430(7002):857-64. doi: 10.1038/nature02806. Nature. 2004. PMID: 15318213
A genome-wide survey of structural variation between human and chimpanzee.
Newman TL, Tuzun E, Morrison VA, Hayden KE, Ventura M, McGrath SD, Rocchi M, Eichler EE. Newman TL, et al. Among authors: eichler ee. Genome Res. 2005 Oct;15(10):1344-56. doi: 10.1101/gr.4338005. Epub 2005 Sep 16. Genome Res. 2005. PMID: 16169929 Free PMC article.
A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications.
She X, Liu G, Ventura M, Zhao S, Misceo D, Roberto R, Cardone MF, Rocchi M; NISC Comparative Sequencing Program; Green ED, Archidiacano N, Eichler EE. She X, et al. Among authors: eichler ee. Genome Res. 2006 May;16(5):576-83. doi: 10.1101/gr.4949406. Epub 2006 Apr 10. Genome Res. 2006. PMID: 16606706 Free PMC article.
Haplotype sorting using human fosmid clone end-sequence pairs.
Kidd JM, Cheng Z, Graves T, Fulton B, Wilson RK, Eichler EE. Kidd JM, et al. Among authors: eichler ee. Genome Res. 2008 Dec;18(12):2016-23. doi: 10.1101/gr.081786.108. Epub 2008 Oct 3. Genome Res. 2008. PMID: 18836033 Free PMC article.
611 results