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The bio.tools registry of software tools and data resources for the life sciences.
Ison J, Ienasescu H, Chmura P, Rydza E, Ménager H, Kalaš M, Schwämmle V, Grüning B, Beard N, Lopez R, Duvaud S, Stockinger H, Persson B, Vařeková RS, Raček T, Vondrášek J, Peterson H, Salumets A, Jonassen I, Hooft R, Nyrönen T, Valencia A, Capella S, Gelpí J, Zambelli F, Savakis B, Leskošek B, Rapacki K, Blanchet C, Jimenez R, Oliveira A, Vriend G, Collin O, van Helden J, Løngreen P, Brunak S. Ison J, et al. Among authors: vondrasek j. Genome Biol. 2019 Aug 12;20(1):164. doi: 10.1186/s13059-019-1772-6. Genome Biol. 2019. PMID: 31405382 Free PMC article.
What are the minimal folding seeds in proteins? Experimental and theoretical assessment of secondary structure propensities of small peptide fragments.
Osifová Z, Kalvoda T, Galgonek J, Culka M, Vondrášek J, Bouř P, Bednárová L, Andrushchenko V, Dračínský M, Rulíšek L. Osifová Z, et al. Among authors: vondrasek j. Chem Sci. 2023 Nov 23;15(2):594-608. doi: 10.1039/d3sc04960d. eCollection 2024 Jan 3. Chem Sci. 2023. PMID: 38179543 Free PMC article.
A community proposal to integrate proteomics activities in ELIXIR.
Vizcaíno JA, Walzer M, Jiménez RC, Bittremieux W, Bouyssié D, Carapito C, Corrales F, Ferro M, Heck AJR, Horvatovich P, Hubalek M, Lane L, Laukens K, Levander F, Lisacek F, Novak P, Palmblad M, Piovesan D, Pühler A, Schwämmle V, Valkenborg D, van Rijswijk M, Vondrasek J, Eisenacher M, Martens L, Kohlbacher O. Vizcaíno JA, et al. Among authors: vondrasek j. F1000Res. 2017 Jun 13;6:ELIXIR-875. doi: 10.12688/f1000research.11751.1. eCollection 2017. F1000Res. 2017. PMID: 28713550 Free PMC article.
Amino Acid Interaction (INTAA) web server.
Galgonek J, Vymetal J, Jakubec D, Vondrášek J. Galgonek J, et al. Among authors: vondrasek j. Nucleic Acids Res. 2017 Jul 3;45(W1):W388-W392. doi: 10.1093/nar/gkx352. Nucleic Acids Res. 2017. PMID: 28472475 Free PMC article.
139 results