Baker D - Search Results

1

Sequence-Structure-Binding Relationships Reveal Adhesion Behavior of the Car9 Solid-Binding Peptide: An Integrated Experimental and Simulation Study.

Hellner B, Alamdari S, Pyles H, Zhang S, Prakash A, Sprenger KG, De Yoreo JJ, Baker D, Pfaendtner J, Baneyx F. Hellner B, et al. Among authors: baker d. J Am Chem Soc. 2020 Feb 5;142(5):2355-2363. doi: 10.1021/jacs.9b11617. Epub 2020 Jan 24. J Am Chem Soc. 2020. PMID: 31934768

2

Computational design of an unnatural amino acid dependent metalloprotein with atomic level accuracy.

Mills JH, Khare SD, Bolduc JM, Forouhar F, Mulligan VK, Lew S, Seetharaman J, Tong L, Stoddard BL, Baker D. Mills JH, et al. Among authors: baker d. J Am Chem Soc. 2013 Sep 11;135(36):13393-9. doi: 10.1021/ja403503m. Epub 2013 Aug 29. J Am Chem Soc. 2013. PMID: 23924187 Free PMC article.

3

Designing Two-Dimensional Protein Arrays through Fusion of Multimers and Interface Mutations.

Matthaei JF, DiMaio F, Richards JJ, Pozzo LD, Baker D, Baneyx F. Matthaei JF, et al. Among authors: baker d. Nano Lett. 2015 Aug 12;15(8):5235-9. doi: 10.1021/acs.nanolett.5b01499. Epub 2015 May 26. Nano Lett. 2015. PMID: 25986921

4

Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.

Heinisch T, Pellizzoni M, Dürrenberger M, Tinberg CE, Köhler V, Klehr J, Häussinger D, Baker D, Ward TR. Heinisch T, et al. Among authors: baker d. J Am Chem Soc. 2015 Aug 19;137(32):10414-9. doi: 10.1021/jacs.5b06622. Epub 2015 Aug 7. J Am Chem Soc. 2015. PMID: 26226626

5

De novo design of self-assembling helical protein filaments.

Shen H, Fallas JA, Lynch E, Sheffler W, Parry B, Jannetty N, Decarreau J, Wagenbach M, Vicente JJ, Chen J, Wang L, Dowling Q, Oberdorfer G, Stewart L, Wordeman L, De Yoreo J, Jacobs-Wagner C, Kollman J, Baker D. Shen H, et al. Among authors: baker d. Science. 2018 Nov 9;362(6415):705-709. doi: 10.1126/science.aau3775. Science. 2018. PMID: 30409885 Free PMC article.

6

Self-Assembling 2D Arrays with de Novo Protein Building Blocks.

Chen Z, Johnson MC, Chen J, Bick MJ, Boyken SE, Lin B, De Yoreo JJ, Kollman JM, Baker D, DiMaio F. Chen Z, et al. Among authors: baker d. J Am Chem Soc. 2019 Jun 5;141(22):8891-8895. doi: 10.1021/jacs.9b01978. Epub 2019 May 10. J Am Chem Soc. 2019. PMID: 31050411 Free PMC article.

7

Controlling protein assembly on inorganic crystals through designed protein interfaces.

Pyles H, Zhang S, De Yoreo JJ, Baker D. Pyles H, et al. Among authors: baker d. Nature. 2019 Jul;571(7764):251-256. doi: 10.1038/s41586-019-1361-6. Epub 2019 Jul 10. Nature. 2019. PMID: 31292559 Free PMC article.

8

Engineering Biomolecular Self-Assembly at Solid-Liquid Interfaces.

Zhang S, Chen J, Liu J, Pyles H, Baker D, Chen CL, De Yoreo JJ. Zhang S, et al. Among authors: baker d. Adv Mater. 2021 Jun;33(23):e1905784. doi: 10.1002/adma.201905784. Epub 2020 Jul 6. Adv Mater. 2021. PMID: 32627885 Review.

9

Quantifying the Dynamics of Protein Self-Organization Using Deep Learning Analysis of Atomic Force Microscopy Data.

Ziatdinov M, Zhang S, Dollar O, Pfaendtner J, Mundy CJ, Li X, Pyles H, Baker D, De Yoreo JJ, Kalinin SV. Ziatdinov M, et al. Among authors: baker d. Nano Lett. 2021 Jan 13;21(1):158-165. doi: 10.1021/acs.nanolett.0c03447. Epub 2020 Dec 11. Nano Lett. 2021. PMID: 33306401

10

Design of biologically active binary protein 2D materials.

Ben-Sasson AJ, Watson JL, Sheffler W, Johnson MC, Bittleston A, Somasundaram L, Decarreau J, Jiao F, Chen J, Mela I, Drabek AA, Jarrett SM, Blacklow SC, Kaminski CF, Hura GL, De Yoreo JJ, Kollman JM, Ruohola-Baker H, Derivery E, Baker D. Ben-Sasson AJ, et al. Among authors: baker d. Nature. 2021 Jan;589(7842):468-473. doi: 10.1038/s41586-020-03120-8. Epub 2021 Jan 6. Nature. 2021. PMID: 33408408 Free PMC article.

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