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ASimulatoR: splice-aware RNA-Seq data simulation.
Bioinformatics. 2021 Sep 29;37(18):3008-3010. doi: 10.1093/bioinformatics/btab142.
Bioinformatics. 2021.
PMID: 33647976
A systematic comparison of novel and existing differential analysis methods for CyTOF data.
Arend L, Bernett J, Manz Q, Klug M, Lazareva O, Baumbach J, Bongiovanni D, List M.
Arend L, et al. Among authors: manz q.
Brief Bioinform. 2022 Jan 17;23(1):bbab471. doi: 10.1093/bib/bbab471.
Brief Bioinform. 2022.
PMID: 34850807
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Un-biased housekeeping gene panel selection for high-validity gene expression analysis.
Casas AI, Hassan AA, Manz Q, Wiwie C, Kleikers P, Egea J, López MG, List M, Baumbach J, Schmidt HHHW.
Casas AI, et al. Among authors: manz q.
Sci Rep. 2022 Jul 19;12(1):12324. doi: 10.1038/s41598-022-15989-8.
Sci Rep. 2022.
PMID: 35853974
Free PMC article.
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Computational tools for inferring transcription factor activity.
Hecker D, Lauber M, Behjati Ardakani F, Ashrafiyan S, Manz Q, Kersting J, Hoffmann M, Schulz MH, List M.
Hecker D, et al. Among authors: manz q.
Proteomics. 2023 Dec;23(23-24):e2200462. doi: 10.1002/pmic.202200462. Epub 2023 Sep 14.
Proteomics. 2023.
PMID: 37706624
Review.
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Drugst.One - a plug-and-play solution for online systems medicine and network-based drug repurposing.
Maier A, Hartung M, Abovsky M, Adamowicz K, Bader GD, Baier S, Blumenthal DB, Chen J, Elkjaer ML, Garcia-Hernandez C, Helmy M, Hoffmann M, Jurisica I, Kotlyar M, Lazareva O, Levi H, List M, Lobentanzer S, Loscalzo J, Malod-Dognin N, Manz Q, Matschinske J, Mee M, Oubounyt M, Pastrello C, Pico AR, Pillich RT, Poschenrieder JM, Pratt D, Pržulj N, Sadegh S, Saez-Rodriguez J, Sarkar S, Shaked G, Shamir R, Trummer N, Turhan U, Wang RS, Zolotareva O, Baumbach J.
Maier A, et al. Among authors: manz q.
Nucleic Acids Res. 2024 May 23:gkae388. doi: 10.1093/nar/gkae388. Online ahead of print.
Nucleic Acids Res. 2024.
PMID: 38783119
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Drugst.One - A plug-and-play solution for online systems medicine and network-based drug repurposing.
Maier A, Hartung M, Abovsky M, Adamowicz K, Bader GD, Baier S, Blumenthal DB, Chen J, Elkjaer ML, Garcia-Hernandez C, Helmy M, Hoffmann M, Jurisica I, Kotlyar M, Lazareva O, Levi H, List M, Lobentanzer S, Loscalzo J, Malod-Dognin N, Manz Q, Matschinske J, Mee M, Oubounyt M, Pico AR, Pillich RT, Poschenrieder JM, Pratt D, Pržulj N, Sadegh S, Saez-Rodriguez J, Sarkar S, Shaked G, Shamir R, Trummer N, Turhan U, Wang R, Zolotareva O, Baumbach J.
Maier A, et al. Among authors: manz q.
ArXiv [Preprint]. 2023 Jul 4:arXiv:2305.15453v2.
ArXiv. 2023.
Update in:
Nucleic Acids Res. 2024 May 23:gkae388. doi: 10.1093/nar/gkae388.
PMID: 37332567
Free PMC article.
Updated.
Preprint.
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