Ibarra B - Search Results

1

DNA replication machinery: Insights from in vitro single-molecule approaches.

Bocanegra R, Ismael Plaza GA, Pulido CR, Ibarra B. Bocanegra R, et al. Among authors: ibarra b. Comput Struct Biotechnol J. 2021 Apr 20;19:2057-2069. doi: 10.1016/j.csbj.2021.04.013. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 33995902 Free PMC article. Review.

2

Dynamic constriction and fission of endoplasmic reticulum membranes by reticulon.

Espadas J, Pendin D, Bocanegra R, Escalada A, Misticoni G, Trevisan T, Velasco Del Olmo A, Montagna A, Bova S, Ibarra B, Kuzmin PI, Bashkirov PV, Shnyrova AV, Frolov VA, Daga A. Espadas J, et al. Among authors: ibarra b. Nat Commun. 2019 Nov 22;10(1):5327. doi: 10.1038/s41467-019-13327-7. Nat Commun. 2019. PMID: 31757972 Free PMC article.

3

Understanding the paradoxical mechanical response of in-phase A-tracts at different force regimes.

Marin-Gonzalez A, Pastrana CL, Bocanegra R, Martín-González A, Vilhena JG, Pérez R, Ibarra B, Aicart-Ramos C, Moreno-Herrero F. Marin-Gonzalez A, et al. Among authors: ibarra b. Nucleic Acids Res. 2020 May 21;48(9):5024-5036. doi: 10.1093/nar/gkaa225. Nucleic Acids Res. 2020. PMID: 32282908 Free PMC article.

4

DNA replication: In vitro single-molecule manipulation data analysis and models.

Jarillo J, Ibarra B, Cao-García FJ. Jarillo J, et al. Among authors: ibarra b. Comput Struct Biotechnol J. 2021 Jun 24;19:3765-3778. doi: 10.1016/j.csbj.2021.06.032. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34285777 Free PMC article. Review.

5

In vitro single-molecule manipulation studies of viral DNA replication.

Bocanegra R, Plaza G A I, Ibarra B. Bocanegra R, et al. Among authors: ibarra b. Enzymes. 2021;49:115-148. doi: 10.1016/bs.enz.2021.09.001. Epub 2021 Oct 13. Enzymes. 2021. PMID: 34696830

6

DNA replication machineries: Structural insights from crystallography and electron microscopy.

Bocanegra R, Ortíz-Rodríguez M, Zumeta L, Plaza-G A I, Faro E, Ibarra B. Bocanegra R, et al. Among authors: ibarra b. Enzymes. 2023;54:249-271. doi: 10.1016/bs.enz.2023.07.004. Epub 2023 Jul 27. Enzymes. 2023. PMID: 37945174

7

Active DNA unwinding dynamics during processive DNA replication.

Morin JA, Cao FJ, Lázaro JM, Arias-Gonzalez JR, Valpuesta JM, Carrascosa JL, Salas M, Ibarra B. Morin JA, et al. Among authors: ibarra b. Proc Natl Acad Sci U S A. 2012 May 22;109(21):8115-20. doi: 10.1073/pnas.1204759109. Epub 2012 May 9. Proc Natl Acad Sci U S A. 2012. PMID: 22573817 Free PMC article.

8

Optical Tweezers to Investigate the Structure and Energetics of Single-Stranded DNA-Binding Protein-DNA Complexes.

Morin JA, Cerrón F, Cao-García FJ, Ibarra B. Morin JA, et al. Among authors: ibarra b. Methods Mol Biol. 2021;2281:273-288. doi: 10.1007/978-1-0716-1290-3_17. Methods Mol Biol. 2021. PMID: 33847965

9

Measurements of Real-Time Replication Kinetics of DNA Polymerases on ssDNA Templates Coated with Single-Stranded DNA-Binding Proteins.

Cerrón F, Ibarra B. Cerrón F, et al. Among authors: ibarra b. Methods Mol Biol. 2021;2281:289-301. doi: 10.1007/978-1-0716-1290-3_18. Methods Mol Biol. 2021. PMID: 33847966

10

Mechanical stability of low-humidity single DNA molecules.

Hormeño S, Ibarra B, Valpuesta JM, Carrascosa JL, Arias-Gonzalez JR. Hormeño S, et al. Among authors: ibarra b. Biopolymers. 2012 Apr;97(4):199-208. doi: 10.1002/bip.21728. Epub 2011 Oct 23. Biopolymers. 2012. PMID: 22020764

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