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An extended reconstruction of human gut microbiota metabolism of dietary compounds.
Nat Commun. 2021 Aug 5;12(1):4728. doi: 10.1038/s41467-021-25056-x.
Nat Commun. 2021.
PMID: 34354065
Free PMC article.
Effect of Freezing on Gut Microbiota Composition and Functionality for In Vitro Fermentation Experiments.
Pérez-Burillo S, Hinojosa-Nogueira D, Navajas-Porras B, Blasco T, Balzerani F, Lerma-Aguilera A, León D, Pastoriza S, Apaolaza I, Planes FJ, Francino MP, Rufián-Henares JÁ.
Pérez-Burillo S, et al. Among authors: balzerani f.
Nutrients. 2021 Jun 27;13(7):2207. doi: 10.3390/nu13072207.
Nutrients. 2021.
PMID: 34199047
Free PMC article.
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Prediction of degradation pathways of phenolic compounds in the human gut microbiota through enzyme promiscuity methods.
Balzerani F, Hinojosa-Nogueira D, Cendoya X, Blasco T, Pérez-Burillo S, Apaolaza I, Francino MP, Rufián-Henares JÁ, Planes FJ.
Balzerani F, et al.
NPJ Syst Biol Appl. 2022 Jul 12;8(1):24. doi: 10.1038/s41540-022-00234-9.
NPJ Syst Biol Appl. 2022.
PMID: 35831427
Free PMC article.
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Extending PROXIMAL to predict degradation pathways of phenolic compounds in the human gut microbiota.
Balzerani F, Blasco T, Pérez-Burillo S, Valcarcel LV, Hassoun S, Planes FJ.
Balzerani F, et al.
NPJ Syst Biol Appl. 2024 May 27;10(1):56. doi: 10.1038/s41540-024-00381-1.
NPJ Syst Biol Appl. 2024.
PMID: 38802371
Free PMC article.
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BN-BacArena: Bayesian network extension of BacArena for the dynamic simulation of microbial communities.
Blasco T, Balzerani F, Valcárcel LV, Larrañaga P, Bielza C, Francino MP, Rufián-Henares JÁ, Planes FJ, Pérez-Burillo S.
Blasco T, et al. Among authors: balzerani f.
Bioinformatics. 2024 May 2;40(5):btae266. doi: 10.1093/bioinformatics/btae266.
Bioinformatics. 2024.
PMID: 38688585
Free PMC article.
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