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FEAST: fast expectation-maximization for microbial source tracking.
Shenhav L, Thompson M, Joseph TA, Briscoe L, Furman O, Bogumil D, Mizrahi I, Pe'er I, Halperin E. Shenhav L, et al. Among authors: halperin e. Nat Methods. 2019 Jul;16(7):627-632. doi: 10.1038/s41592-019-0431-x. Epub 2019 Jun 10. Nat Methods. 2019. PMID: 31182859 Free PMC article.
Scalable probabilistic PCA for large-scale genetic variation data.
Agrawal A, Chiu AM, Le M, Halperin E, Sankararaman S. Agrawal A, et al. Among authors: halperin e. PLoS Genet. 2020 May 29;16(5):e1008773. doi: 10.1371/journal.pgen.1008773. eCollection 2020 May. PLoS Genet. 2020. PMID: 32469896 Free PMC article.
STENSL: Microbial Source Tracking with ENvironment SeLection.
An U, Shenhav L, Olson CA, Hsiao EY, Halperin E, Sankararaman S. An U, et al. Among authors: halperin e. mSystems. 2022 Oct 26;7(5):e0099521. doi: 10.1128/msystems.00995-21. Epub 2022 Sep 1. mSystems. 2022. PMID: 36047699 Free PMC article.
Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative.
Johnson R, Ding Y, Venkateswaran V, Bhattacharya A, Boulier K, Chiu A, Knyazev S, Schwarz T, Freund M, Zhan L, Burch KS, Caggiano C, Hill B, Rakocz N, Balliu B, Denny CT, Sul JH, Zaitlen N, Arboleda VA, Halperin E, Sankararaman S, Butte MJ; UCLA Precision Health Data Discovery Repository Working Group, UCLA Precision Health ATLAS Working Group; Lajonchere C, Geschwind DH, Pasaniuc B. Johnson R, et al. Among authors: halperin e. Genome Med. 2022 Sep 9;14(1):104. doi: 10.1186/s13073-022-01106-x. Genome Med. 2022. PMID: 36085083 Free PMC article.
510 results