Andermann T - Search Results

1

Target sequence capture of Barnadesioideae (Compositae) demonstrates the utility of low coverage loci in phylogenomic analyses.

Ferreira PL, Batista R, Andermann T, Groppo M, Bacon CD, Antonelli A. Ferreira PL, et al. Among authors: andermann t. Mol Phylogenet Evol. 2022 Apr;169:107432. doi: 10.1016/j.ympev.2022.107432. Epub 2022 Feb 4. Mol Phylogenet Evol. 2022. PMID: 35131421 Free article.

2

Estimating Age-Dependent Extinction: Contrasting Evidence from Fossils and Phylogenies.

Hagen O, Andermann T, Quental TB, Antonelli A, Silvestro D. Hagen O, et al. Among authors: andermann t. Syst Biol. 2018 May 1;67(3):458-474. doi: 10.1093/sysbio/syx082. Syst Biol. 2018. PMID: 29069434 Free PMC article.

3

Allele Phasing Greatly Improves the Phylogenetic Utility of Ultraconserved Elements.

Andermann T, Fernandes AM, Olsson U, Töpel M, Pfeil B, Oxelman B, Aleixo A, Faircloth BC, Antonelli A. Andermann T, et al. Syst Biol. 2019 Jan 1;68(1):32-46. doi: 10.1093/sysbio/syy039. Syst Biol. 2019. PMID: 29771371 Free PMC article.

4

SECAPR-a bioinformatics pipeline for the rapid and user-friendly processing of targeted enriched Illumina sequences, from raw reads to alignments.

Andermann T, Cano Á, Zizka A, Bacon C, Antonelli A. Andermann T, et al. PeerJ. 2018 Jul 13;6:e5175. doi: 10.7717/peerj.5175. eCollection 2018. PeerJ. 2018. PMID: 30023140 Free PMC article.

5

Conceptual and empirical advances in Neotropical biodiversity research.

Antonelli A, Ariza M, Albert J, Andermann T, Azevedo J, Bacon C, Faurby S, Guedes T, Hoorn C, Lohmann LG, Matos-Maraví P, Ritter CD, Sanmartín I, Silvestro D, Tejedor M, Ter Steege H, Tuomisto H, Werneck FP, Zizka A, Edwards SV. Antonelli A, et al. Among authors: andermann t. PeerJ. 2018 Oct 4;6:e5644. doi: 10.7717/peerj.5644. eCollection 2018. PeerJ. 2018. PMID: 30310740 Free PMC article.

6

Phylogenomics and biogeography of the world's thrushes (Aves, Turdus): new evidence for a more parsimonious evolutionary history.

Batista R, Olsson U, Andermann T, Aleixo A, Ribas CC, Antonelli A. Batista R, et al. Among authors: andermann t. Proc Biol Sci. 2020 Jan 29;287(1919):20192400. doi: 10.1098/rspb.2019.2400. Epub 2020 Jan 22. Proc Biol Sci. 2020. PMID: 31964299 Free PMC article.

7

A Guide to Carrying Out a Phylogenomic Target Sequence Capture Project.

Andermann T, Torres Jiménez MF, Matos-Maraví P, Batista R, Blanco-Pastor JL, Gustafsson ALS, Kistler L, Liberal IM, Oxelman B, Bacon CD, Antonelli A. Andermann T, et al. Front Genet. 2020 Feb 21;10:1407. doi: 10.3389/fgene.2019.01407. eCollection 2019. Front Genet. 2020. PMID: 32153629 Free PMC article. Review.

8

The past and future human impact on mammalian diversity.

Andermann T, Faurby S, Turvey ST, Antonelli A, Silvestro D. Andermann T, et al. Sci Adv. 2020 Sep 4;6(36):eabb2313. doi: 10.1126/sciadv.abb2313. Print 2020 Sep. Sci Adv. 2020. PMID: 32917612 Free PMC article.

9

A bioinformatic platform to integrate target capture and whole genome sequences of various read depths for phylogenomics.

G Ribeiro P, Torres Jiménez MF, Andermann T, Antonelli A, Bacon CD, Matos-Maraví P. G Ribeiro P, et al. Among authors: andermann t. Mol Ecol. 2021 Dec;30(23):6021-6035. doi: 10.1111/mec.16240. Epub 2021 Oct 31. Mol Ecol. 2021. PMID: 34674330 Free PMC article.

10

Estimating Alpha, Beta, and Gamma Diversity Through Deep Learning.

Andermann T, Antonelli A, Barrett RL, Silvestro D. Andermann T, et al. Front Plant Sci. 2022 Apr 19;13:839407. doi: 10.3389/fpls.2022.839407. eCollection 2022. Front Plant Sci. 2022. PMID: 35519811 Free PMC article.

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