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TiSA: TimeSeriesAnalysis-a pipeline for the analysis of longitudinal transcriptomics data.
Lefol Y, Korfage T, Mjelle R, Prebensen C, Lüders T, Müller B, Krokan H, Sarno A, Alsøe L; CONSORTIUM LEMONAID; Berdal JE, Sætrom P, Nilsen H, Domanska D. Lefol Y, et al. Among authors: domanska d. NAR Genom Bioinform. 2023 Mar 3;5(1):lqad020. doi: 10.1093/nargab/lqad020. eCollection 2023 Mar. NAR Genom Bioinform. 2023. PMID: 36879899 Free PMC article.
Uracil Accumulation and Mutagenesis Dominated by Cytosine Deamination in CpG Dinucleotides in Mice Lacking UNG and SMUG1.
Alsøe L, Sarno A, Carracedo S, Domanska D, Dingler F, Lirussi L, SenGupta T, Tekin NB, Jobert L, Alexandrov LB, Galashevskaya A, Rada C, Sandve GK, Rognes T, Krokan HE, Nilsen H. Alsøe L, et al. Among authors: domanska d. Sci Rep. 2017 Aug 3;7(1):7199. doi: 10.1038/s41598-017-07314-5. Sci Rep. 2017. PMID: 28775312 Free PMC article.
The uracil-DNA glycosylase UNG protects the fitness of normal and cancer B cells expressing AID.
Safavi S, Larouche A, Zahn A, Patenaude AM, Domanska D, Dionne K, Rognes T, Dingler F, Kang SK, Liu Y, Johnson N, Hébert J, Verdun RE, Rada CA, Vega F, Nilsen H, Di Noia JM. Safavi S, et al. Among authors: domanska d. NAR Cancer. 2020 Aug 27;2(3):zcaa019. doi: 10.1093/narcan/zcaa019. eCollection 2020 Sep. NAR Cancer. 2020. PMID: 33554121 Free PMC article.
Erratum: The uracil-DNA glycosylase UNG protects the fitness of normal and cancer B cells expressing AID.
Safavi S, Larouche A, Zahn A, Patenaude AM, Domanska D, Dionne K, Rognes T, Dingler F, Kang SK, Liu Y, Johnson N, Hébert J, Verdun RE, Rada CA, Vega F, Nilsen H, Noia JMD. Safavi S, et al. Among authors: domanska d. NAR Cancer. 2021 Jan 6;3(1):zcaa045. doi: 10.1093/narcan/zcaa045. eCollection 2021 Mar. NAR Cancer. 2021. PMID: 34316697 Free PMC article.
Cellsnake: a user-friendly tool for single-cell RNA sequencing analysis.
Umu SU, Rapp Vander-Elst K, Karlsen VT, Chouliara M, Bækkevold ES, Jahnsen FL, Domanska D. Umu SU, et al. Among authors: domanska d. Gigascience. 2022 Dec 28;12:giad091. doi: 10.1093/gigascience/giad091. Epub 2023 Oct 27. Gigascience. 2022. PMID: 37889009 Free PMC article.
The rainfall plot: its motivation, characteristics and pitfalls.
Domanska D, Vodák D, Lund-Andersen C, Salvatore S, Hovig E, Sandve GK. Domanska D, et al. BMC Bioinformatics. 2017 May 18;18(1):264. doi: 10.1186/s12859-017-1679-8. BMC Bioinformatics. 2017. PMID: 28521741 Free PMC article.
39 results