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Efflux pump gene amplifications bypass necessity of multiple target mutations for resistance against dual-targeting antibiotic.
Nat Commun. 2023 Jun 9;14(1):3402. doi: 10.1038/s41467-023-38507-4.
Nat Commun. 2023.
PMID: 37296157
Free PMC article.
Cellular NADH and NADPH Conformation as a Real-Time Fluorescence-Based Metabolic Indicator under Pressurized Conditions.
Heidelman M, Dhakal B, Gikunda M, Silva KPT, Risal L, Rodriguez AI, Abe F, Urayama P.
Heidelman M, et al. Among authors: silva kpt.
Molecules. 2021 Aug 19;26(16):5020. doi: 10.3390/molecules26165020.
Molecules. 2021.
PMID: 34443607
Free PMC article.
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A neural network model predicts community-level signaling states in a diverse microbial community.
Silva KPT, Boedicker JQ.
Silva KPT, et al.
PLoS Comput Biol. 2019 Jun 24;15(6):e1007166. doi: 10.1371/journal.pcbi.1007166. eCollection 2019 Jun.
PLoS Comput Biol. 2019.
PMID: 31233492
Free PMC article.
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Biogenic Control of Manganese Doping in Zinc Sulfide Nanomaterial Using Shewanella oneidensis MR-1.
Chellamuthu P, Naughton K, Pirbadian S, Silva KPT, Chavez MS, El-Naggar MY, Boedicker J.
Chellamuthu P, et al. Among authors: silva kpt.
Front Microbiol. 2019 May 7;10:938. doi: 10.3389/fmicb.2019.00938. eCollection 2019.
Front Microbiol. 2019.
PMID: 31134005
Free PMC article.
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Disruption of microbial communication yields a two-dimensional percolation transition.
Silva KPT, Yusufaly TI, Chellamuthu P, Boedicker JQ.
Silva KPT, et al.
Phys Rev E. 2019 Apr;99(4-1):042409. doi: 10.1103/PhysRevE.99.042409.
Phys Rev E. 2019.
PMID: 31108688
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Single-cell variability of growth interactions within a two-species bacterial community.
Guo X, Silva KPT, Boedicker JQ.
Guo X, et al. Among authors: silva kpt.
Phys Biol. 2019 Mar 7;16(3):036001. doi: 10.1088/1478-3975/ab005f.
Phys Biol. 2019.
PMID: 30665208
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Engineering bacteria for biogenic synthesis of chalcogenide nanomaterials.
Chellamuthu P, Tran F, Silva KPT, Chavez MS, El-Naggar MY, Boedicker JQ.
Chellamuthu P, et al. Among authors: silva kpt.
Microb Biotechnol. 2019 Jan;12(1):161-172. doi: 10.1111/1751-7915.13320. Epub 2018 Oct 17.
Microb Biotechnol. 2019.
PMID: 30369058
Free PMC article.
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Quantifying the strength of quorum sensing crosstalk within microbial communities.
Silva KPT, Chellamuthu P, Boedicker JQ.
Silva KPT, et al.
PLoS Comput Biol. 2017 Oct 19;13(10):e1005809. doi: 10.1371/journal.pcbi.1005809. eCollection 2017 Oct.
PLoS Comput Biol. 2017.
PMID: 29049387
Free PMC article.
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