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rCRUX: A Rapid and Versatile Tool for Generating Metabarcoding Reference libraries in R.
bioRxiv [Preprint]. 2023 Jun 3:2023.05.31.543005. doi: 10.1101/2023.05.31.543005.
bioRxiv. 2023.
PMID: 37397980
Free PMC article.
Updated.
Preprint.
rCRUX: A Rapid and Versatile Tool for Generating Metabarcoding Reference libraries in R.
Curd EE, Gal L, Gallego R, Silliman K, Nielsen S, Gold Z.
Curd EE, et al.
Environ DNA. 2024 Jan;6(1):e489. doi: 10.1002/edn3.489. Epub 2023 Nov 29.
Environ DNA. 2024.
PMID: 38370872
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A manager's guide to using eDNA metabarcoding in marine ecosystems.
Gold Z, Wall AR, Schweizer TM, Pentcheff ND, Curd EE, Barber PH, Meyer RS, Wayne R, Stolzenbach K, Prickett K, Luedy J, Wetzer R.
Gold Z, et al. Among authors: curd ee.
PeerJ. 2022 Nov 15;10:e14071. doi: 10.7717/peerj.14071. eCollection 2022.
PeerJ. 2022.
PMID: 36405018
Free PMC article.
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Improving metabarcoding taxonomic assignment: A case study of fishes in a large marine ecosystem.
Gold Z, Curd EE, Goodwin KD, Choi ES, Frable BW, Thompson AR, Walker HJ Jr, Burton RS, Kacev D, Martz LD, Barber PH.
Gold Z, et al. Among authors: curd ee.
Mol Ecol Resour. 2021 Oct;21(7):2546-2564. doi: 10.1111/1755-0998.13450. Epub 2021 Jul 8.
Mol Ecol Resour. 2021.
PMID: 34235858
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Landscape analyses using eDNA metabarcoding and Earth observation predict community biodiversity in California.
Lin M, Simons AL, Harrigan RJ, Curd EE, Schneider FD, Ruiz-Ramos DV, Gold Z, Osborne MG, Shirazi S, Schweizer TM, Moore TN, Fox EA, Turba R, Garcia-Vedrenne AE, Helman SK, Rutledge K, Mejia MP, Marwayana O, Munguia Ramos MN, Wetzer R, Pentcheff ND, McTavish EJ, Dawson MN, Shapiro B, Wayne RK, Meyer RS.
Lin M, et al. Among authors: curd ee.
Ecol Appl. 2021 Sep;31(6):e02379. doi: 10.1002/eap.2379. Epub 2021 Jul 8.
Ecol Appl. 2021.
PMID: 34013632
Free PMC article.
Item in Clipboard
ranacapa: An R package and Shiny web app to explore environmental DNA data with exploratory statistics and interactive visualizations.
Kandlikar GS, Gold ZJ, Cowen MC, Meyer RS, Freise AC, Kraft NJB, Moberg-Parker J, Sprague J, Kushner DJ, Curd EE.
Kandlikar GS, et al. Among authors: curd ee.
F1000Res. 2018 Nov 1;7:1734. doi: 10.12688/f1000research.16680.1. eCollection 2018.
F1000Res. 2018.
PMID: 30613396
Free PMC article.
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Mapping the risk of avian influenza in wild birds in the US.
Fuller TL, Saatchi SS, Curd EE, Toffelmier E, Thomassen HA, Buermann W, DeSante DF, Nott MP, Saracco JF, Ralph C, Alexander JD, Pollinger JP, Smith TB.
Fuller TL, et al. Among authors: curd ee.
BMC Infect Dis. 2010 Jun 23;10:187. doi: 10.1186/1471-2334-10-187.
BMC Infect Dis. 2010.
PMID: 20573228
Free PMC article.
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