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Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data.
Breden F, Luning Prak ET, Peters B, Rubelt F, Schramm CA, Busse CE, Vander Heiden JA, Christley S, Bukhari SAC, Thorogood A, Matsen Iv FA, Wine Y, Laserson U, Klatzmann D, Douek DC, Lefranc MP, Collins AM, Bubela T, Kleinstein SH, Watson CT, Cowell LG, Scott JK, Kepler TB. Breden F, et al. Among authors: collins am. Front Immunol. 2017 Nov 1;8:1418. doi: 10.3389/fimmu.2017.01418. eCollection 2017. Front Immunol. 2017. PMID: 29163494 Free PMC article.
Inferred Allelic Variants of Immunoglobulin Receptor Genes: A System for Their Evaluation, Documentation, and Naming.
Ohlin M, Scheepers C, Corcoran M, Lees WD, Busse CE, Bagnara D, Thörnqvist L, Bürckert JP, Jackson KJL, Ralph D, Schramm CA, Marthandan N, Breden F, Scott J, Matsen Iv FA, Greiff V, Yaari G, Kleinstein SH, Christley S, Sherkow JS, Kossida S, Lefranc MP, van Zelm MC, Watson CT, Collins AM. Ohlin M, et al. Among authors: collins am. Front Immunol. 2019 Mar 18;10:435. doi: 10.3389/fimmu.2019.00435. eCollection 2019. Front Immunol. 2019. PMID: 30936866 Free PMC article. Review.
OGRDB: a reference database of inferred immune receptor genes.
Lees W, Busse CE, Corcoran M, Ohlin M, Scheepers C, Matsen FA, Yaari G, Watson CT; AIRR Community; Collins A, Shepherd AJ. Lees W, et al. Nucleic Acids Res. 2020 Jan 8;48(D1):D964-D970. doi: 10.1093/nar/gkz822. Nucleic Acids Res. 2020. PMID: 31566225 Free PMC article.
VDJbase: an adaptive immune receptor genotype and haplotype database.
Omer A, Shemesh O, Peres A, Polak P, Shepherd AJ, Watson CT, Boyd SD, Collins AM, Lees W, Yaari G. Omer A, et al. Among authors: collins am. Nucleic Acids Res. 2020 Jan 8;48(D1):D1051-D1056. doi: 10.1093/nar/gkz872. Nucleic Acids Res. 2020. PMID: 31602484 Free PMC article.
302 results