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A versatile information retrieval framework for evaluating profile strength and similarity.
bioRxiv [Preprint]. 2024 Apr 2:2024.04.01.587631. doi: 10.1101/2024.04.01.587631.
bioRxiv. 2024.
PMID: 38617315
Free PMC article.
Preprint.
Learning representations for image-based profiling of perturbations.
Moshkov N, Bornholdt M, Benoit S, Smith M, McQuin C, Goodman A, Senft RA, Han Y, Babadi M, Horvath P, Cimini BA, Carpenter AE, Singh S, Caicedo JC.
Moshkov N, et al. Among authors: bornholdt m.
Nat Commun. 2024 Feb 21;15(1):1594. doi: 10.1038/s41467-024-45999-1.
Nat Commun. 2024.
PMID: 38383513
Free PMC article.
Item in Clipboard
Reproducible image-based profiling with Pycytominer.
Serrano E, Chandrasekaran SN, Bunten D, Brewer KI, Tomkinson J, Kern R, Bornholdt M, Fleming S, Pei R, Arevalo J, Tsang H, Rubinetti V, Tromans-Coia C, Becker T, Weisbart E, Bunne C, Kalinin AA, Senft R, Taylor SJ, Jamali N, Adeboye A, Abbasi HS, Goodman A, Caicedo JC, Carpenter AE, Cimini BA, Singh S, Way GP.
Serrano E, et al. Among authors: bornholdt m.
ArXiv [Preprint]. 2023 Nov 22:arXiv:2311.13417v1.
ArXiv. 2023.
PMID: 38045474
Free PMC article.
Preprint.
Item in Clipboard
Morphology and gene expression profiling provide complementary information for mapping cell state.
Way GP, Natoli T, Adeboye A, Litichevskiy L, Yang A, Lu X, Caicedo JC, Cimini BA, Karhohs K, Logan DJ, Rohban MH, Kost-Alimova M, Hartland K, Bornholdt M, Chandrasekaran SN, Haghighi M, Weisbart E, Singh S, Subramanian A, Carpenter AE.
Way GP, et al. Among authors: bornholdt m.
Cell Syst. 2022 Nov 16;13(11):911-923.e9. doi: 10.1016/j.cels.2022.10.001. Epub 2022 Oct 28.
Cell Syst. 2022.
PMID: 36395727
Free PMC article.
Item in Clipboard
Rapid Instant Thin-Layer Chromatography System for Determining the Radiochemical Purity of 68Ga-DOTATATE.
Bornholdt MG, Woelfel KM, Fang P, Jacobson MS, Hung JC.
Bornholdt MG, et al.
J Nucl Med Technol. 2018 Sep;46(3):285-287. doi: 10.2967/jnmt.117.200873. Epub 2018 May 3.
J Nucl Med Technol. 2018.
PMID: 29724807
Free article.
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