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Dissemination of extensively drug-resistant NDM-producing Providencia stuartii in Europe linked to patients transferred from Ukraine, March 2022 to March 2023.
Witteveen S, Hans JB, Izdebski R, Hasman H, Samuelsen Ø, Dortet L, Pfeifer Y, Delappe N, Oteo-Iglesias J, Żabicka D, Cormican M, Sandfort M, Reichert F, Pöntinen AK, Fischer MA, Verkaik N, Pérez-Vazquez M, Pfennigwerth N, Hammerum AM, Hallstrøm S, Biedrzycka M, Räisänen K, Wielders CC, Urbanowicz P, de Haan A, Westmo K, Landman F, van der Heide HG, Lansu S, Zwittink RD, Notermans DW, Guzek A, Kondratiuk V, Salmanov A, Haller S, Linkevicius M, Gatermann S, Kohlenberg A, Gniadkowski M, Werner G, Hendrickx AP. Witteveen S, et al. Among authors: pontinen ak. Euro Surveill. 2024 Jun;29(23):2300616. doi: 10.2807/1560-7917.ES.2024.29.23.2300616. Euro Surveill. 2024. PMID: 38847120 Free PMC article.
Detecting co-selection through excess linkage disequilibrium in bacterial genomes.
Mallawaarachchi S, Tonkin-Hill G, Pöntinen AK, Calland JK, Gladstone RA, Arredondo-Alonso S, MacAlasdair N, Thorpe HA, Top J, Sheppard SK, Balding D, Croucher NJ, Corander J. Mallawaarachchi S, et al. Among authors: pontinen ak. NAR Genom Bioinform. 2024 Jun 6;6(2):lqae061. doi: 10.1093/nargab/lqae061. eCollection 2024 Jun. NAR Genom Bioinform. 2024. PMID: 38846349 Free PMC article.
Modulation of multidrug-resistant clone success in Escherichia coli populations: a longitudinal, multi-country, genomic and antibiotic usage cohort study.
Pöntinen AK, Gladstone RA, Pesonen H, Pesonen M, Cléon F, Parcell BJ, Kallonen T, Simonsen GS, Croucher NJ, McNally A, Parkhill J, Johnsen PJ, Samuelsen Ø, Corander J. Pöntinen AK, et al. Lancet Microbe. 2024 Feb;5(2):e142-e150. doi: 10.1016/S2666-5247(23)00292-6. Epub 2024 Jan 11. Lancet Microbe. 2024. PMID: 38219757 Free article.
The population-level impact of Enterococcus faecalis genetics on intestinal colonization and extraintestinal infection.
Chaguza C, Pöntinen AK, Top J, Arredondo-Alonso S, Freitas AR, Novais C, Torres C, Bentley SD, Peixe L, Coque TM, Willems RJL, Corander J. Chaguza C, et al. Among authors: pontinen ak. Microbiol Spectr. 2023 Dec 12;11(6):e0020123. doi: 10.1128/spectrum.00201-23. Epub 2023 Oct 9. Microbiol Spectr. 2023. PMID: 37811975 Free PMC article.
Mge-cluster: a reference-free approach for typing bacterial plasmids.
Arredondo-Alonso S, Gladstone RA, Pöntinen AK, Gama JA, Schürch AC, Lanza VF, Johnsen PJ, Samuelsen Ø, Tonkin-Hill G, Corander J. Arredondo-Alonso S, et al. Among authors: pontinen ak. NAR Genom Bioinform. 2023 Jul 10;5(3):lqad066. doi: 10.1093/nargab/lqad066. eCollection 2023 Sep. NAR Genom Bioinform. 2023. PMID: 37435357 Free PMC article.
Nationwide, population-based observational study of the molecular epidemiology and temporal trend of carbapenemase-producing Enterobacterales in Norway, 2015 to 2021.
Ljungquist O, Haldorsen B, Pöntinen AK, Janice J, Josefsen EH, Elstrøm P, Kacelnik O; Norwegian Study Group on CPE; Sundsfjord A, Samuelsen Ø; Members of The Norwegian Study Group on CPE. Ljungquist O, et al. Among authors: pontinen ak. Euro Surveill. 2023 Jul;28(27):2200774. doi: 10.2807/1560-7917.ES.2023.28.27.2200774. Euro Surveill. 2023. PMID: 37410381 Free PMC article.
Evolutionary and functional history of the Escherichia coli K1 capsule.
Arredondo-Alonso S, Blundell-Hunter G, Fu Z, Gladstone RA, Fillol-Salom A, Loraine J, Cloutman-Green E, Johnsen PJ, Samuelsen Ø, Pöntinen AK, Cléon F, Chavez-Bueno S, De la Cruz MA, Ares MA, Vongsouvath M, Chmielarczyk A, Horner C, Klein N, McNally A, Reis JN, Penadés JR, Thomson NR, Corander J, Taylor PW, McCarthy AJ. Arredondo-Alonso S, et al. Among authors: pontinen ak. Nat Commun. 2023 Jun 15;14(1):3294. doi: 10.1038/s41467-023-39052-w. Nat Commun. 2023. PMID: 37322051 Free PMC article.
17 results