Adey AC - Search Results

1

Highly scalable generation of DNA methylation profiles in single cells.

Mulqueen RM, Pokholok D, Norberg SJ, Torkenczy KA, Fields AJ, Sun D, Sinnamon JR, Shendure J, Trapnell C, O'Roak BJ, Xia Z, Steemers FJ, Adey AC. Mulqueen RM, et al. Among authors: adey ac. Nat Biotechnol. 2018 Jun;36(5):428-431. doi: 10.1038/nbt.4112. Epub 2018 Apr 9. Nat Biotechnol. 2018. PMID: 29644997 Free PMC article.

2

Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition.

Adey A, Morrison HG, Asan, Xun X, Kitzman JO, Turner EH, Stackhouse B, MacKenzie AP, Caruccio NC, Zhang X, Shendure J. Adey A, et al. Genome Biol. 2010;11(12):R119. doi: 10.1186/gb-2010-11-12-r119. Epub 2010 Dec 8. Genome Biol. 2010. PMID: 21143862 Free PMC article.

3

Haplotype-resolved genome sequencing of a Gujarati Indian individual.

Kitzman JO, Mackenzie AP, Adey A, Hiatt JB, Patwardhan RP, Sudmant PH, Ng SB, Alkan C, Qiu R, Eichler EE, Shendure J. Kitzman JO, et al. Nat Biotechnol. 2011 Jan;29(1):59-63. doi: 10.1038/nbt.1740. Epub 2010 Dec 19. Nat Biotechnol. 2011. PMID: 21170042 Free PMC article.

4

Ultra-low-input, tagmentation-based whole-genome bisulfite sequencing.

Adey A, Shendure J. Adey A, et al. Genome Res. 2012 Jun;22(6):1139-43. doi: 10.1101/gr.136242.111. Epub 2012 Mar 30. Genome Res. 2012. PMID: 22466172 Free PMC article.

5

Capturing native long-range contiguity by in situ library construction and optical sequencing.

Schwartz JJ, Lee C, Hiatt JB, Adey A, Shendure J. Schwartz JJ, et al. Proc Natl Acad Sci U S A. 2012 Nov 13;109(46):18749-54. doi: 10.1073/pnas.1202680109. Epub 2012 Oct 29. Proc Natl Acad Sci U S A. 2012. PMID: 23112150 Free PMC article.

6

The haplotype-resolved genome and epigenome of the aneuploid HeLa cancer cell line.

Adey A, Burton JN, Kitzman JO, Hiatt JB, Lewis AP, Martin BK, Qiu R, Lee C, Shendure J. Adey A, et al. Nature. 2013 Aug 8;500(7461):207-11. doi: 10.1038/nature12064. Nature. 2013. PMID: 23925245 Free PMC article.

7

Tagmentation-based whole-genome bisulfite sequencing.

Wang Q, Gu L, Adey A, Radlwimmer B, Wang W, Hovestadt V, Bähr M, Wolf S, Shendure J, Eils R, Plass C, Weichenhan D. Wang Q, et al. Nat Protoc. 2013 Oct;8(10):2022-32. doi: 10.1038/nprot.2013.118. Epub 2013 Sep 26. Nat Protoc. 2013. PMID: 24071908

8

Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions.

Burton JN, Adey A, Patwardhan RP, Qiu R, Kitzman JO, Shendure J. Burton JN, et al. Nat Biotechnol. 2013 Dec;31(12):1119-25. doi: 10.1038/nbt.2727. Epub 2013 Nov 3. Nat Biotechnol. 2013. PMID: 24185095 Free PMC article.

9

megaTALs: a rare-cleaving nuclease architecture for therapeutic genome engineering.

Boissel S, Jarjour J, Astrakhan A, Adey A, Gouble A, Duchateau P, Shendure J, Stoddard BL, Certo MT, Baker D, Scharenberg AM. Boissel S, et al. Nucleic Acids Res. 2014 Feb;42(4):2591-601. doi: 10.1093/nar/gkt1224. Epub 2013 Nov 26. Nucleic Acids Res. 2014. PMID: 24285304 Free PMC article.

10

Decoding long nanopore sequencing reads of natural DNA.

Laszlo AH, Derrington IM, Ross BC, Brinkerhoff H, Adey A, Nova IC, Craig JM, Langford KW, Samson JM, Daza R, Doering K, Shendure J, Gundlach JH. Laszlo AH, et al. Nat Biotechnol. 2014 Aug;32(8):829-33. doi: 10.1038/nbt.2950. Epub 2014 Jun 25. Nat Biotechnol. 2014. PMID: 24964173 Free PMC article.

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