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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2002 1
2005 2
2008 1
2009 2
2010 3
2011 2
2012 6
2013 5
2014 3
2015 6
2016 6
2017 1
2018 4
2019 2
2020 2
2021 5
2022 5
2023 2
2024 1

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53 results

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Page 1
Longitudinal single-cell RNA-seq analysis reveals stress-promoted chemoresistance in metastatic ovarian cancer.
Zhang K, Erkan EP, Jamalzadeh S, Dai J, Andersson N, Kaipio K, Lamminen T, Mansuri N, Huhtinen K, Carpén O, Hietanen S, Oikkonen J, Hynninen J, Virtanen A, Häkkinen A, Hautaniemi S, Vähärautio A. Zhang K, et al. Among authors: hakkinen a. Sci Adv. 2022 Feb 25;8(8):eabm1831. doi: 10.1126/sciadv.abm1831. Epub 2022 Feb 23. Sci Adv. 2022. PMID: 35196078 Free PMC article.
Evolutionary states and trajectories characterized by distinct pathways stratify patients with ovarian high grade serous carcinoma.
Lahtinen A, Lavikka K, Virtanen A, Li Y, Jamalzadeh S, Skorda A, Lauridsen AR, Zhang K, Marchi G, Isoviita VM, Ariotta V, Lehtonen O, Muranen TA, Huhtinen K, Carpén O, Hietanen S, Senkowski W, Kallunki T, Häkkinen A, Hynninen J, Oikkonen J, Hautaniemi S. Lahtinen A, et al. Among authors: hakkinen a. Cancer Cell. 2023 Jun 12;41(6):1103-1117.e12. doi: 10.1016/j.ccell.2023.04.017. Epub 2023 May 18. Cancer Cell. 2023. PMID: 37207655 Free article.
SCIP: a single-cell image processor toolbox.
Martins L, Neeli-Venkata R, Oliveira SMD, Häkkinen A, Ribeiro AS, Fonseca JM. Martins L, et al. Among authors: hakkinen a. Bioinformatics. 2018 Dec 15;34(24):4318-4320. doi: 10.1093/bioinformatics/bty505. Bioinformatics. 2018. PMID: 29931314
Anduril 2: upgraded large-scale data integration framework.
Cervera A, Rantanen V, Ovaska K, Laakso M, Nuñez-Fontarnau J, Alkodsi A, Casado J, Facciotto C, Häkkinen A, Louhimo R, Karinen S, Zhang K, Lavikka K, Lyly L, Pal Singh M, Hautaniemi S. Cervera A, et al. Among authors: hakkinen a. Bioinformatics. 2019 Oct 1;35(19):3815-3817. doi: 10.1093/bioinformatics/btz133. Bioinformatics. 2019. PMID: 30793160
Agile workflow for interactive analysis of mass cytometry data.
Casado J, Lehtonen O, Rantanen V, Kaipio K, Pasquini L, Häkkinen A, Petrucci E, Hynninen J, Hietanen S, Carpén O, Biffoni M, Färkkilä A, Hautaniemi S. Casado J, et al. Among authors: hakkinen a. Bioinformatics. 2021 Jun 9;37(9):1263-1268. doi: 10.1093/bioinformatics/btaa946. Bioinformatics. 2021. PMID: 33135052 Free PMC article.
Network-guided identification of cancer-selective combinatorial therapies in ovarian cancer.
He L, Bulanova D, Oikkonen J, Häkkinen A, Zhang K, Zheng S, Wang W, Erkan EP, Carpén O, Joutsiniemi T, Hietanen S, Hynninen J, Huhtinen K, Hautaniemi S, Vähärautio A, Tang J, Wennerberg K, Aittokallio T. He L, et al. Among authors: hakkinen a. Brief Bioinform. 2021 Nov 5;22(6):bbab272. doi: 10.1093/bib/bbab272. Brief Bioinform. 2021. PMID: 34343245 Free PMC article.
Differential DNA methylation in recovery from shift work disorder.
Lahtinen A, Häkkinen A, Puttonen S, Vanttola P, Viitasalo K, Porkka-Heiskanen T, Härmä M, Paunio T. Lahtinen A, et al. Among authors: hakkinen a. Sci Rep. 2021 Feb 3;11(1):2895. doi: 10.1038/s41598-021-82627-0. Sci Rep. 2021. PMID: 33536559 Free PMC article.
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration.
L B Almeida B, M Bahrudeen MN, Chauhan V, Dash S, Kandavalli V, Häkkinen A, Lloyd-Price J, S D Cristina P, Baptista ISC, Gupta A, Kesseli J, Dufour E, Smolander OP, Nykter M, Auvinen P, Jacobs HT, M D Oliveira S, S Ribeiro A. L B Almeida B, et al. Among authors: hakkinen a. Nucleic Acids Res. 2022 Jul 8;50(12):6801-6819. doi: 10.1093/nar/gkac540. Nucleic Acids Res. 2022. PMID: 35748858 Free PMC article.
53 results