Ariyurek Y - Search Results

1

Adenine base editing of the DUX4 polyadenylation signal for targeted genetic therapy in facioscapulohumeral muscular dystrophy.

Šikrová D, Cadar VA, Ariyurek Y, Laros JFJ, Balog J, van der Maarel SM. Šikrová D, et al. Among authors: ariyurek y. Mol Ther Nucleic Acids. 2021 Jun 1;25:342-354. doi: 10.1016/j.omtn.2021.05.020. eCollection 2021 Sep 3. Mol Ther Nucleic Acids. 2021. PMID: 34484861 Free PMC article.

2

Non-sequential and multi-step splicing of the dystrophin transcript.

Gazzoli I, Pulyakhina I, Verwey NE, Ariyurek Y, Laros JF, 't Hoen PA, Aartsma-Rus A. Gazzoli I, et al. Among authors: ariyurek y. RNA Biol. 2016;13(3):290-305. doi: 10.1080/15476286.2015.1125074. Epub 2015 Dec 15. RNA Biol. 2016. PMID: 26670121 Free PMC article.

3

Determining the quality and complexity of next-generation sequencing data without a reference genome.

Anvar SY, Khachatryan L, Vermaat M, van Galen M, Pulyakhina I, Ariyurek Y, Kraaijeveld K, den Dunnen JT, de Knijff P, 't Hoen PA, Laros JF. Anvar SY, et al. Among authors: ariyurek y. Genome Biol. 2014;15(12):555. doi: 10.1186/s13059-014-0555-3. Genome Biol. 2014. PMID: 25514851 Free PMC article.

4

Tissue-specific transcript annotation and expression profiling with complementary next-generation sequencing technologies.

Hestand MS, Klingenhoff A, Scherf M, Ariyurek Y, Ramos Y, van Workum W, Suzuki M, Werner T, van Ommen GJ, den Dunnen JT, Harbers M, 't Hoen PA. Hestand MS, et al. Among authors: ariyurek y. Nucleic Acids Res. 2010 Sep;38(16):e165. doi: 10.1093/nar/gkq602. Epub 2010 Jul 7. Nucleic Acids Res. 2010. PMID: 20615900 Free PMC article.

5

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms.

't Hoen PA, Ariyurek Y, Thygesen HH, Vreugdenhil E, Vossen RH, de Menezes RX, Boer JM, van Ommen GJ, den Dunnen JT. 't Hoen PA, et al. Among authors: ariyurek y. Nucleic Acids Res. 2008 Dec;36(21):e141. doi: 10.1093/nar/gkn705. Epub 2008 Oct 15. Nucleic Acids Res. 2008. PMID: 18927111 Free PMC article.

6

Detailed genetic and functional analysis of the hDMDdel52/mdx mouse model.

Yavas A, Weij R, van Putten M, Kourkouta E, Beekman C, Puoliväli J, Bragge T, Ahtoniemi T, Knijnenburg J, Hoogenboom ME, Ariyurek Y, Aartsma-Rus A, van Deutekom J, Datson N. Yavas A, et al. Among authors: ariyurek y. PLoS One. 2020 Dec 23;15(12):e0244215. doi: 10.1371/journal.pone.0244215. eCollection 2020. PLoS One. 2020. PMID: 33362201 Free PMC article.

7

DeepSAGE reveals genetic variants associated with alternative polyadenylation and expression of coding and non-coding transcripts.

Zhernakova DV, de Klerk E, Westra HJ, Mastrokolias A, Amini S, Ariyurek Y, Jansen R, Penninx BW, Hottenga JJ, Willemsen G, de Geus EJ, Boomsma DI, Veldink JH, van den Berg LH, Wijmenga C, den Dunnen JT, van Ommen GJ, 't Hoen PA, Franke L. Zhernakova DV, et al. Among authors: ariyurek y. PLoS Genet. 2013 Jun;9(6):e1003594. doi: 10.1371/journal.pgen.1003594. Epub 2013 Jun 20. PLoS Genet. 2013. PMID: 23818875 Free PMC article.

8

Genome-wide assessment of differential roles for p300 and CBP in transcription regulation.

Ramos YF, Hestand MS, Verlaan M, Krabbendam E, Ariyurek Y, van Galen M, van Dam H, van Ommen GJ, den Dunnen JT, Zantema A, 't Hoen PA. Ramos YF, et al. Among authors: ariyurek y. Nucleic Acids Res. 2010 Sep;38(16):5396-408. doi: 10.1093/nar/gkq184. Epub 2010 Apr 30. Nucleic Acids Res. 2010. PMID: 20435671 Free PMC article.

9

Directed adenovirus evolution using engineered mutator viral polymerases.

Uil TG, Vellinga J, de Vrij J, van den Hengel SK, Rabelink MJ, Cramer SJ, Eekels JJ, Ariyurek Y, van Galen M, Hoeben RC. Uil TG, et al. Among authors: ariyurek y. Nucleic Acids Res. 2011 Mar;39(5):e30. doi: 10.1093/nar/gkq1258. Epub 2010 Dec 7. Nucleic Acids Res. 2011. PMID: 21138963 Free PMC article.

10

Full-length mRNA sequencing uncovers a widespread coupling between transcription initiation and mRNA processing.

Anvar SY, Allard G, Tseng E, Sheynkman GM, de Klerk E, Vermaat M, Yin RH, Johansson HE, Ariyurek Y, den Dunnen JT, Turner SW, 't Hoen PAC. Anvar SY, et al. Among authors: ariyurek y. Genome Biol. 2018 Mar 29;19(1):46. doi: 10.1186/s13059-018-1418-0. Genome Biol. 2018. PMID: 29598823 Free PMC article.

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