Arkin AP - Search Results

1

Global Analysis of Biomineralization Genes in Magnetospirillum magneticum AMB-1.

McCausland HC, Wetmore KM, Arkin AP, Komeili A. McCausland HC, et al. Among authors: arkin ap. mSystems. 2022 Feb 22;7(1):e0103721. doi: 10.1128/msystems.01037-21. Epub 2022 Jan 25. mSystems. 2022. PMID: 35076272 Free PMC article.

2

Evidence-based annotation of gene function in Shewanella oneidensis MR-1 using genome-wide fitness profiling across 121 conditions.

Deutschbauer A, Price MN, Wetmore KM, Shao W, Baumohl JK, Xu Z, Nguyen M, Tamse R, Davis RW, Arkin AP. Deutschbauer A, et al. Among authors: arkin ap. PLoS Genet. 2011 Nov;7(11):e1002385. doi: 10.1371/journal.pgen.1002385. Epub 2011 Nov 17. PLoS Genet. 2011. PMID: 22125499 Free PMC article.

3

Indirect and suboptimal control of gene expression is widespread in bacteria.

Price MN, Deutschbauer AM, Skerker JM, Wetmore KM, Ruths T, Mar JS, Kuehl JV, Shao W, Arkin AP. Price MN, et al. Among authors: arkin ap. Mol Syst Biol. 2013 Apr 16;9:660. doi: 10.1038/msb.2013.16. Mol Syst Biol. 2013. PMID: 23591776 Free PMC article.

4

Dissecting a complex chemical stress: chemogenomic profiling of plant hydrolysates.

Skerker JM, Leon D, Price MN, Mar JS, Tarjan DR, Wetmore KM, Deutschbauer AM, Baumohl JK, Bauer S, Ibáñez AB, Mitchell VD, Wu CH, Hu P, Hazen T, Arkin AP. Skerker JM, et al. Among authors: arkin ap. Mol Syst Biol. 2013 Jun 18;9:674. doi: 10.1038/msb.2013.30. Mol Syst Biol. 2013. PMID: 23774757 Free PMC article.

5

Functional genomics with a comprehensive library of transposon mutants for the sulfate-reducing bacterium Desulfovibrio alaskensis G20.

Kuehl JV, Price MN, Ray J, Wetmore KM, Esquivel Z, Kazakov AE, Nguyen M, Kuehn R, Davis RW, Hazen TC, Arkin AP, Deutschbauer A. Kuehl JV, et al. Among authors: arkin ap. mBio. 2014 May 27;5(3):e01041-14. doi: 10.1128/mBio.01041-14. mBio. 2014. PMID: 24865553 Free PMC article.

6

Towards an informative mutant phenotype for every bacterial gene.

Deutschbauer A, Price MN, Wetmore KM, Tarjan DR, Xu Z, Shao W, Leon D, Arkin AP, Skerker JM. Deutschbauer A, et al. Among authors: arkin ap. J Bacteriol. 2014 Oct;196(20):3643-55. doi: 10.1128/JB.01836-14. Epub 2014 Aug 11. J Bacteriol. 2014. PMID: 25112473 Free PMC article.

7

The genetic basis of energy conservation in the sulfate-reducing bacterium Desulfovibrio alaskensis G20.

Price MN, Ray J, Wetmore KM, Kuehl JV, Bauer S, Deutschbauer AM, Arkin AP. Price MN, et al. Among authors: arkin ap. Front Microbiol. 2014 Oct 31;5:577. doi: 10.3389/fmicb.2014.00577. eCollection 2014. Front Microbiol. 2014. PMID: 25400629 Free PMC article.

8

Novel mechanism for scavenging of hypochlorite involving a periplasmic methionine-rich Peptide and methionine sulfoxide reductase.

Melnyk RA, Youngblut MD, Clark IC, Carlson HK, Wetmore KM, Price MN, Iavarone AT, Deutschbauer AM, Arkin AP, Coates JD. Melnyk RA, et al. Among authors: arkin ap. mBio. 2015 May 12;6(3):e00233-15. doi: 10.1128/mBio.00233-15. mBio. 2015. PMID: 25968643 Free PMC article.

9

Rapid quantification of mutant fitness in diverse bacteria by sequencing randomly bar-coded transposons.

Wetmore KM, Price MN, Waters RJ, Lamson JS, He J, Hoover CA, Blow MJ, Bristow J, Butland G, Arkin AP, Deutschbauer A. Wetmore KM, et al. Among authors: arkin ap. mBio. 2015 May 12;6(3):e00306-15. doi: 10.1128/mBio.00306-15. mBio. 2015. PMID: 25968644 Free PMC article.

10

Determining Roles of Accessory Genes in Denitrification by Mutant Fitness Analyses.

Vaccaro BJ, Thorgersen MP, Lancaster WA, Price MN, Wetmore KM, Poole FL 2nd, Deutschbauer A, Arkin AP, Adams MW. Vaccaro BJ, et al. Among authors: arkin ap. Appl Environ Microbiol. 2015 Oct 9;82(1):51-61. doi: 10.1128/AEM.02602-15. Print 2016 Jan 1. Appl Environ Microbiol. 2015. PMID: 26452555 Free PMC article.

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