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Assessment of roles for the Rho-specific guanine nucleotide dissociation inhibitor Ly-GDI in platelet function: a spatial systems approach.
Ngo AT, Thierheimer ML, Babur Ö, Rocheleau AD, Huang T, Pang J, Rigg RA, Mitrugno A, Theodorescu D, Burchard J, Nan X, Demir E, McCarty OJ, Aslan JE. Ngo AT, et al. Among authors: babur o. Am J Physiol Cell Physiol. 2017 Apr 1;312(4):C527-C536. doi: 10.1152/ajpcell.00274.2016. Epub 2017 Feb 1. Am J Physiol Cell Physiol. 2017. PMID: 28148498 Free PMC article.
Discovering modulators of gene expression.
Babur O, Demir E, Gönen M, Sander C, Dogrusoz U. Babur O, et al. Nucleic Acids Res. 2010 Sep;38(17):5648-56. doi: 10.1093/nar/gkq287. Epub 2010 May 13. Nucleic Acids Res. 2010. PMID: 20466809 Free PMC article.
Pathway Commons, a web resource for biological pathway data.
Cerami EG, Gross BE, Demir E, Rodchenkov I, Babur O, Anwar N, Schultz N, Bader GD, Sander C. Cerami EG, et al. Among authors: babur o. Nucleic Acids Res. 2011 Jan;39(Database issue):D685-90. doi: 10.1093/nar/gkq1039. Epub 2010 Nov 10. Nucleic Acids Res. 2011. PMID: 21071392 Free PMC article.
Pattern search in BioPAX models.
Babur Ö, Aksoy BA, Rodchenkov I, Sümer SO, Sander C, Demir E. Babur Ö, et al. Bioinformatics. 2014 Jan 1;30(1):139-40. doi: 10.1093/bioinformatics/btt539. Epub 2013 Sep 16. Bioinformatics. 2014. PMID: 24045775 Free PMC article.
PaxtoolsR: pathway analysis in R using Pathway Commons.
Luna A, Babur Ö, Aksoy BA, Demir E, Sander C. Luna A, et al. Among authors: babur o. Bioinformatics. 2016 Apr 15;32(8):1262-4. doi: 10.1093/bioinformatics/btv733. Epub 2015 Dec 18. Bioinformatics. 2016. PMID: 26685306 Free PMC article.
54 results