Baker D - Search Results

1

Computational redesign of a mononuclear zinc metalloenzyme for organophosphate hydrolysis.

Khare SD, Kipnis Y, Greisen P Jr, Takeuchi R, Ashani Y, Goldsmith M, Song Y, Gallaher JL, Silman I, Leader H, Sussman JL, Stoddard BL, Tawfik DS, Baker D. Khare SD, et al. Among authors: baker d. Nat Chem Biol. 2012 Feb 5;8(3):294-300. doi: 10.1038/nchembio.777. Nat Chem Biol. 2012. PMID: 22306579 Free PMC article.

2

Computer-based redesign of a protein folding pathway.

Nauli S, Kuhlman B, Baker D. Nauli S, et al. Among authors: baker d. Nat Struct Biol. 2001 Jul;8(7):602-5. doi: 10.1038/89638. Nat Struct Biol. 2001. PMID: 11427890

3

Accurate computer-based design of a new backbone conformation in the second turn of protein L.

Kuhlman B, O'Neill JW, Kim DE, Zhang KY, Baker D. Kuhlman B, et al. Among authors: baker d. J Mol Biol. 2002 Jan 18;315(3):471-7. doi: 10.1006/jmbi.2001.5229. J Mol Biol. 2002. PMID: 11786026

4

De novo prediction of three-dimensional structures for major protein families.

Bonneau R, Strauss CE, Rohl CA, Chivian D, Bradley P, Malmström L, Robertson T, Baker D. Bonneau R, et al. Among authors: baker d. J Mol Biol. 2002 Sep 6;322(1):65-78. doi: 10.1016/s0022-2836(02)00698-8. J Mol Biol. 2002. PMID: 12215415

5

Design, activity, and structure of a highly specific artificial endonuclease.

Chevalier BS, Kortemme T, Chadsey MS, Baker D, Monnat RJ, Stoddard BL. Chevalier BS, et al. Among authors: baker d. Mol Cell. 2002 Oct;10(4):895-905. doi: 10.1016/s1097-2765(02)00690-1. Mol Cell. 2002. PMID: 12419232 Free article.

6

Design of a novel globular protein fold with atomic-level accuracy.

Kuhlman B, Dantas G, Ireton GC, Varani G, Stoddard BL, Baker D. Kuhlman B, et al. Among authors: baker d. Science. 2003 Nov 21;302(5649):1364-8. doi: 10.1126/science.1089427. Science. 2003. PMID: 14631033

7

Computational redesign of protein-protein interaction specificity.

Kortemme T, Joachimiak LA, Bullock AN, Schuler AD, Stoddard BL, Baker D. Kortemme T, et al. Among authors: baker d. Nat Struct Mol Biol. 2004 Apr;11(4):371-9. doi: 10.1038/nsmb749. Epub 2004 Mar 21. Nat Struct Mol Biol. 2004. PMID: 15034550

8

Computational design of protein-protein interactions.

Kortemme T, Baker D. Kortemme T, et al. Among authors: baker d. Curr Opin Chem Biol. 2004 Feb;8(1):91-7. doi: 10.1016/j.cbpa.2003.12.008. Curr Opin Chem Biol. 2004. PMID: 15036162 Review.

9

Computational thermostabilization of an enzyme.

Korkegian A, Black ME, Baker D, Stoddard BL. Korkegian A, et al. Among authors: baker d. Science. 2005 May 6;308(5723):857-60. doi: 10.1126/science.1107387. Science. 2005. PMID: 15879217 Free PMC article.

10

Computational redesign of endonuclease DNA binding and cleavage specificity.

Ashworth J, Havranek JJ, Duarte CM, Sussman D, Monnat RJ Jr, Stoddard BL, Baker D. Ashworth J, et al. Among authors: baker d. Nature. 2006 Jun 1;441(7093):656-9. doi: 10.1038/nature04818. Nature. 2006. PMID: 16738662 Free PMC article.

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