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Shotgun protein sequencing with meta-contig assembly.
Guthals A, Clauser KR, Bandeira N. Guthals A, et al. Among authors: bandeira n. Mol Cell Proteomics. 2012 Oct;11(10):1084-96. doi: 10.1074/mcp.M111.015768. Epub 2012 Jul 13. Mol Cell Proteomics. 2012. PMID: 22798278 Free PMC article.
Protein identification by spectral networks analysis.
Bandeira N, Tsur D, Frank A, Pevzner PA. Bandeira N, et al. Proc Natl Acad Sci U S A. 2007 Apr 10;104(15):6140-5. doi: 10.1073/pnas.0701130104. Epub 2007 Apr 2. Proc Natl Acad Sci U S A. 2007. PMID: 17404225 Free PMC article.
Clustering millions of tandem mass spectra.
Frank AM, Bandeira N, Shen Z, Tanner S, Briggs SP, Smith RD, Pevzner PA. Frank AM, et al. Among authors: bandeira n. J Proteome Res. 2008 Jan;7(1):113-22. doi: 10.1021/pr070361e. Epub 2007 Dec 8. J Proteome Res. 2008. PMID: 18067247 Free PMC article.
Dereplication and de novo sequencing of nonribosomal peptides.
Ng J, Bandeira N, Liu WT, Ghassemian M, Simmons TL, Gerwick WH, Linington R, Dorrestein PC, Pevzner PA. Ng J, et al. Among authors: bandeira n. Nat Methods. 2009 Aug;6(8):596-9. doi: 10.1038/nmeth.1350. Epub 2009 Jul 13. Nat Methods. 2009. PMID: 19597502 Free PMC article.
154 results