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OncoMX: A Knowledgebase for Exploring Cancer Biomarkers in the Context of Related Cancer and Healthy Data.
Dingerdissen HM, Bastian F, Vijay-Shanker K, Robinson-Rechavi M, Bell A, Gogate N, Gupta S, Holmes E, Kahsay R, Keeney J, Kincaid H, King CH, Liu D, Crichton DJ, Mazumder R. Dingerdissen HM, et al. Among authors: bastian f. JCO Clin Cancer Inform. 2020 Mar;4:210-220. doi: 10.1200/CCI.19.00117. JCO Clin Cancer Inform. 2020. PMID: 32142370 Free PMC article.
vHOG, a multispecies vertebrate ontology of homologous organs groups.
Niknejad A, Comte A, Parmentier G, Roux J, Bastian FB, Robinson-Rechavi M. Niknejad A, et al. Bioinformatics. 2012 Apr 1;28(7):1017-20. doi: 10.1093/bioinformatics/bts048. Epub 2012 Jan 27. Bioinformatics. 2012. PMID: 22285560 Free PMC article.
Recent advances in biocuration: meeting report from the Fifth International Biocuration Conference.
Gaudet P, Arighi C, Bastian F, Bateman A, Blake JA, Cherry MJ, D'Eustachio P, Finn R, Giglio M, Hirschman L, Kania R, Klimke W, Martin MJ, Karsch-Mizrachi I, Munoz-Torres M, Natale D, O'Donovan C, Ouellette F, Pruitt KD, Robinson-Rechavi M, Sansone SA, Schofield P, Sutton G, Van Auken K, Vasudevan S, Wu C, Young J, Mazumder R. Gaudet P, et al. Among authors: bastian f. Database (Oxford). 2012 Oct 29;2012:bas036. doi: 10.1093/database/bas036. Print 2012. Database (Oxford). 2012. PMID: 23110974 Free PMC article.
Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon.
Haendel MA, Balhoff JP, Bastian FB, Blackburn DC, Blake JA, Bradford Y, Comte A, Dahdul WM, Dececchi TA, Druzinsky RE, Hayamizu TF, Ibrahim N, Lewis SE, Mabee PM, Niknejad A, Robinson-Rechavi M, Sereno PC, Mungall CJ. Haendel MA, et al. Among authors: bastian fb. J Biomed Semantics. 2014 May 19;5:21. doi: 10.1186/2041-1480-5-21. eCollection 2014. J Biomed Semantics. 2014. PMID: 25009735 Free PMC article.
The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals.
Bastian FB, Roux J, Niknejad A, Comte A, Fonseca Costa SS, de Farias TM, Moretti S, Parmentier G, de Laval VR, Rosikiewicz M, Wollbrett J, Echchiki A, Escoriza A, Gharib WH, Gonzales-Porta M, Jarosz Y, Laurenczy B, Moret P, Person E, Roelli P, Sanjeev K, Seppey M, Robinson-Rechavi M. Bastian FB, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D831-D847. doi: 10.1093/nar/gkaa793. Nucleic Acids Res. 2021. PMID: 33037820 Free PMC article.
91 results