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Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft.
Sci Rep. 2023 Apr 3;13(1):5420. doi: 10.1038/s41598-023-32568-7.
Sci Rep. 2023.
PMID: 37012431
Free PMC article.
The Cancer-Associated Genetic Variant Rs3903072 Modulates Immune Cells in the Tumor Microenvironment.
Zhang Y, Manjunath M, Yan J, Baur BA, Zhang S, Roy S, Song JS.
Zhang Y, et al. Among authors: baur ba.
Front Genet. 2019 Aug 23;10:754. doi: 10.3389/fgene.2019.00754. eCollection 2019.
Front Genet. 2019.
PMID: 31507631
Free PMC article.
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Data integration for inferring context-specific gene regulatory networks.
Baur B, Shin J, Zhang S, Roy S.
Baur B, et al.
Curr Opin Syst Biol. 2020 Oct;23:38-46. doi: 10.1016/j.coisb.2020.09.005. Epub 2020 Sep 22.
Curr Opin Syst Biol. 2020.
PMID: 33225112
Free PMC article.
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Deciphering the Role of 3D Genome Organization in Breast Cancer Susceptibility.
Baur B, Lee DI, Haag J, Chasman D, Gould M, Roy S.
Baur B, et al.
Front Genet. 2022 Jan 11;12:788318. doi: 10.3389/fgene.2021.788318. eCollection 2021.
Front Genet. 2022.
PMID: 35087569
Free PMC article.
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Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variation.
Baur B, Shin J, Schreiber J, Zhang S, Zhang Y, Manjunath M, Song JS, Stafford Noble W, Roy S.
Baur B, et al.
PLoS Comput Biol. 2023 Jul 10;19(7):e1011286. doi: 10.1371/journal.pcbi.1011286. eCollection 2023 Jul.
PLoS Comput Biol. 2023.
PMID: 37428809
Free PMC article.
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Genetic Fine-Mapping and Identification of Candidate Genes and Variants for Adiposity Traits in Outbred Rats.
Keele GR, Prokop JW, He H, Holl K, Littrell J, Deal A, Francic S, Cui L, Gatti DM, Broman KW, Tschannen M, Tsaih SW, Zagloul M, Kim Y, Baur B, Fox J, Robinson M, Levy S, Flister MJ, Mott R, Valdar W, Solberg Woods LC.
Keele GR, et al.
Obesity (Silver Spring). 2018 Jan;26(1):213-222. doi: 10.1002/oby.22075. Epub 2017 Nov 28.
Obesity (Silver Spring). 2018.
PMID: 29193816
Free PMC article.
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ProcessDriver: A computational pipeline to identify copy number drivers and associated disrupted biological processes in cancer.
Baur B, Bozdag S.
Baur B, et al.
Genomics. 2017 Jul;109(3-4):233-240. doi: 10.1016/j.ygeno.2017.04.004. Epub 2017 Apr 21.
Genomics. 2017.
PMID: 28438487
Free article.
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Publisher Correction: Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft.
Dozmorov MG, Marshall MA, Rashid NS, Grible JM, Valentine A, Olex AL, Murthy K, Chakraborty A, Reyna J, Figueroa DS, Hinojosa-Gonzalez L, Da-Inn Lee E, Baur BA, Roy S, Ay F, Harrell JC.
Dozmorov MG, et al. Among authors: baur ba.
Sci Rep. 2023 May 9;13(1):7522. doi: 10.1038/s41598-023-33284-y.
Sci Rep. 2023.
PMID: 37160896
Free PMC article.
No abstract available.
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