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Whole genome DNA methylation: beyond genes silencing.
Tirado-Magallanes R, Rebbani K, Lim R, Pradhan S, Benoukraf T. Tirado-Magallanes R, et al. Among authors: benoukraf t. Oncotarget. 2017 Jan 17;8(3):5629-5637. doi: 10.18632/oncotarget.13562. Oncotarget. 2017. PMID: 27895318 Free PMC article. Review.
DNMT1-interacting RNAs block gene-specific DNA methylation.
Di Ruscio A, Ebralidze AK, Benoukraf T, Amabile G, Goff LA, Terragni J, Figueroa ME, De Figueiredo Pontes LL, Alberich-Jorda M, Zhang P, Wu M, D'Alò F, Melnick A, Leone G, Ebralidze KK, Pradhan S, Rinn JL, Tenen DG. Di Ruscio A, et al. Among authors: benoukraf t. Nature. 2013 Nov 21;503(7476):371-6. doi: 10.1038/nature12598. Epub 2013 Oct 9. Nature. 2013. PMID: 24107992 Free PMC article.
NicE-seq: high resolution open chromatin profiling.
Ponnaluri VKC, Zhang G, Estève PO, Spracklin G, Sian S, Xu SY, Benoukraf T, Pradhan S. Ponnaluri VKC, et al. Among authors: benoukraf t. Genome Biol. 2017 Jun 28;18(1):122. doi: 10.1186/s13059-017-1247-6. Genome Biol. 2017. PMID: 28655330 Free PMC article.
TIP60 represses activation of endogenous retroviral elements.
Rajagopalan D, Tirado-Magallanes R, Bhatia SS, Teo WS, Sian S, Hora S, Lee KK, Zhang Y, Jadhav SP, Wu Y, Gan YH, Karnani N, Benoukraf T, Jha S. Rajagopalan D, et al. Among authors: benoukraf t. Nucleic Acids Res. 2018 Oct 12;46(18):9456-9470. doi: 10.1093/nar/gky659. Nucleic Acids Res. 2018. PMID: 30053221 Free PMC article.
Lysine acetyltransferase Tip60 is required for hematopoietic stem cell maintenance.
Numata A, Kwok HS, Zhou QL, Li J, Tirado-Magallanes R, Angarica VE, Hannah R, Park J, Wang CQ, Krishnan V, Rajagopalan D, Zhang Y, Zhou S, Welner RS, Osato M, Jha S, Bohlander SK, Göttgens B, Yang H, Benoukraf T, Lough JW, Bararia D, Tenen DG. Numata A, et al. Among authors: benoukraf t. Blood. 2020 Oct 8;136(15):1735-1747. doi: 10.1182/blood.2019001279. Blood. 2020. PMID: 32542325 Free PMC article.
β-Catenin-TCF/LEF signaling promotes steady-state and emergency granulopoiesis via G-CSF receptor upregulation.
Danek P, Kardosova M, Janeckova L, Karkoulia E, Vanickova K, Fabisik M, Lozano-Asencio C, Benoukraf T, Tirado-Magallanes R, Zhou Q, Burocziova M, Rahmatova S, Pytlik R, Brdicka T, Tenen DG, Korinek V, Alberich-Jorda M. Danek P, et al. Among authors: benoukraf t. Blood. 2020 Nov 26;136(22):2574-2587. doi: 10.1182/blood.2019004664. Blood. 2020. PMID: 32822472 Free PMC article.
49 results