Bruggeman FJ - Search Results

1

Trade-off of dynamic fragility but not of robustness in metabolic pathways in silico.

Quinton-Tulloch MJ, Bruggeman FJ, Snoep JL, Westerhoff HV. Quinton-Tulloch MJ, et al. Among authors: bruggeman fj. FEBS J. 2013 Jan;280(1):160-73. doi: 10.1111/febs.12057. Epub 2012 Dec 7. FEBS J. 2013. PMID: 23121761 Free article.

2

Effective bet-hedging through growth rate dependent stability.

de Groot DH, Tjalma AJ, Bruggeman FJ, van Nimwegen E. de Groot DH, et al. Among authors: bruggeman fj. Proc Natl Acad Sci U S A. 2023 Feb 21;120(8):e2211091120. doi: 10.1073/pnas.2211091120. Epub 2023 Feb 13. Proc Natl Acad Sci U S A. 2023. PMID: 36780518 Free PMC article.

3

Understanding spatiotemporal coupling of gene expression using single molecule RNA imaging technologies.

Gerber A, van Otterdijk S, Bruggeman FJ, Tutucci E. Gerber A, et al. Among authors: bruggeman fj. Transcription. 2023 Jun-Oct;14(3-5):105-126. doi: 10.1080/21541264.2023.2199669. Epub 2023 Apr 12. Transcription. 2023. PMID: 37050882 Free PMC article.

4

Macromolecular intelligence in microorganisms.

Bruggeman FJ, van Heeswijk WC, Boogerd FC, Westerhoff HV. Bruggeman FJ, et al. Biol Chem. 2000 Sep-Oct;381(9-10):965-72. doi: 10.1515/BC.2000.119. Biol Chem. 2000. PMID: 11076029 Review.

5

A turbo engine with automatic transmission? How to marry chemicomotion to the subtleties and robustness of life.

Koefoed S, Otten M, Koebmann B, Bruggeman F, Bakker B, Snoep J, Krab K, van Spanning R, van Verseveld H, Jensen P, Koster J, Westerhoff H. Koefoed S, et al. Biochim Biophys Acta. 2002 Sep 10;1555(1-3):75-82. doi: 10.1016/s0005-2728(02)00258-x. Biochim Biophys Acta. 2002. PMID: 12206895 Free article.

6

ECA: control in ecosystems.

Westerhoff HV, Getz WM, Bruggeman F, Hofmeyr JH, Rohwer JM, Snoep JL. Westerhoff HV, et al. Mol Biol Rep. 2002;29(1-2):113-7. doi: 10.1023/a:1020396906319. Mol Biol Rep. 2002. PMID: 12241039

7

Untangling the wires: a strategy to trace functional interactions in signaling and gene networks.

Kholodenko BN, Kiyatkin A, Bruggeman FJ, Sontag E, Westerhoff HV, Hoek JB. Kholodenko BN, et al. Among authors: bruggeman fj. Proc Natl Acad Sci U S A. 2002 Oct 1;99(20):12841-6. doi: 10.1073/pnas.192442699. Epub 2002 Sep 19. Proc Natl Acad Sci U S A. 2002. PMID: 12242336 Free PMC article.

8

Modular response analysis of cellular regulatory networks.

Bruggeman FJ, Westerhoff HV, Hoek JB, Kholodenko BN. Bruggeman FJ, et al. J Theor Biol. 2002 Oct 21;218(4):507-20. J Theor Biol. 2002. PMID: 12384053

9

Principles behind the multifarious control of signal transduction. ERK phosphorylation and kinase/phosphatase control.

Hornberg JJ, Bruggeman FJ, Binder B, Geest CR, de Vaate AJ, Lankelma J, Heinrich R, Westerhoff HV. Hornberg JJ, et al. Among authors: bruggeman fj. FEBS J. 2005 Jan;272(1):244-58. doi: 10.1111/j.1432-1033.2004.04404.x. FEBS J. 2005. PMID: 15634347 Free article.

10

The multifarious short-term regulation of ammonium assimilation of Escherichia coli: dissection using an in silico replica.

Bruggeman FJ, Boogerd FC, Westerhoff HV. Bruggeman FJ, et al. FEBS J. 2005 Apr;272(8):1965-85. doi: 10.1111/j.1742-4658.2005.04626.x. FEBS J. 2005. PMID: 15819889 Free article.

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