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2021 | 2 |
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Page 1
Epigenetic plasticity cooperates with cell-cell interactions to direct pancreatic tumorigenesis.
Science. 2023 May 12;380(6645):eadd5327. doi: 10.1126/science.add5327. Epub 2023 May 12.
Science. 2023.
PMID: 37167403
Free PMC article.
A gene-environment-induced epigenetic program initiates tumorigenesis.
Alonso-Curbelo D, Ho YJ, Burdziak C, Maag JLV, Morris JP 4th, Chandwani R, Chen HA, Tsanov KM, Barriga FM, Luan W, Tasdemir N, Livshits G, Azizi E, Chun J, Wilkinson JE, Mazutis L, Leach SD, Koche R, Pe'er D, Lowe SW.
Alonso-Curbelo D, et al. Among authors: burdziak c.
Nature. 2021 Feb;590(7847):642-648. doi: 10.1038/s41586-020-03147-x. Epub 2021 Feb 3.
Nature. 2021.
PMID: 33536616
Free PMC article.
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Recovering Gene Interactions from Single-Cell Data Using Data Diffusion.
van Dijk D, Sharma R, Nainys J, Yim K, Kathail P, Carr AJ, Burdziak C, Moon KR, Chaffer CL, Pattabiraman D, Bierie B, Mazutis L, Wolf G, Krishnaswamy S, Pe'er D.
van Dijk D, et al. Among authors: burdziak c.
Cell. 2018 Jul 26;174(3):716-729.e27. doi: 10.1016/j.cell.2018.05.061. Epub 2018 Jun 28.
Cell. 2018.
PMID: 29961576
Free PMC article.
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Mapping the evolution of T cell states during response and resistance to adoptive cellular therapy.
Bachireddy P, Azizi E, Burdziak C, Nguyen VN, Ennis CS, Maurer K, Park CY, Choo ZN, Li S, Gohil SH, Ruthen NG, Ge Z, Keskin DB, Cieri N, Livak KJ, Kim HT, Neuberg DS, Soiffer RJ, Ritz J, Alyea EP, Pe'er D, Wu CJ.
Bachireddy P, et al. Among authors: burdziak c.
Cell Rep. 2023 Aug 29;42(8):113011. doi: 10.1016/j.celrep.2023.113011. Epub 2023 Aug 8.
Cell Rep. 2023.
PMID: 37556329
Free PMC article.
No abstract available.
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scKINETICS: inference of regulatory velocity with single-cell transcriptomics data.
Burdziak C, Zhao CJ, Haviv D, Alonso-Curbelo D, Lowe SW, Pe'er D.
Burdziak C, et al.
Bioinformatics. 2023 Jun 30;39(39 Suppl 1):i394-i403. doi: 10.1093/bioinformatics/btad267.
Bioinformatics. 2023.
PMID: 37387147
Free PMC article.
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Novel Approach for Pancreas Transcriptomics Reveals the Cellular Landscape in Homeostasis and Acute Pancreatitis.
Aney KJ, Jeong WJ, Vallejo AF, Burdziak C, Chen E, Wang A, Koak P, Wise K, Jensen K, Pe'er D, Dougan SK, Martelotto L, Nissim S.
Aney KJ, et al. Among authors: burdziak c.
Gastroenterology. 2024 Feb 6:S0016-5085(24)00130-6. doi: 10.1053/j.gastro.2024.01.043. Online ahead of print.
Gastroenterology. 2024.
PMID: 38325760
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Mapping the evolution of T cell states during response and resistance to adoptive cellular therapy.
Bachireddy P, Azizi E, Burdziak C, Nguyen VN, Ennis CS, Maurer K, Park CY, Choo ZN, Li S, Gohil SH, Ruthen NG, Ge Z, Keskin DB, Cieri N, Livak KJ, Kim HT, Neuberg DS, Soiffer RJ, Ritz J, Alyea EP, Pe'er D, Wu CJ.
Bachireddy P, et al. Among authors: burdziak c.
Cell Rep. 2021 Nov 9;37(6):109992. doi: 10.1016/j.celrep.2021.109992.
Cell Rep. 2021.
PMID: 34758319
Free PMC article.
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