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A biochemical network modeling of a whole-cell.
Burke PEP, Campos CBL, Costa LDF, Quiles MG. Burke PEP, et al. Sci Rep. 2020 Aug 6;10(1):13303. doi: 10.1038/s41598-020-70145-4. Sci Rep. 2020. PMID: 32764598 Free PMC article.
Biological network border detection.
Burke PEP, Comin CH, Silva FN, Costa LDF. Burke PEP, et al. Integr Biol (Camb). 2017 Dec 11;9(12):947-955. doi: 10.1039/c7ib00161d. Integr Biol (Camb). 2017. PMID: 29138780
Toward Community Standards and Software for Whole-Cell Modeling.
Waltemath D, Karr JR, Bergmann FT, Chelliah V, Hucka M, Krantz M, Liebermeister W, Mendes P, Myers CJ, Pir P, Alaybeyoglu B, Aranganathan NK, Baghalian K, Bittig AT, Burke PE, Cantarelli M, Chew YH, Costa RS, Cursons J, Czauderna T, Goldberg AP, Gomez HF, Hahn J, Hameri T, Gardiol DF, Kazakiewicz D, Kiselev I, Knight-Schrijver V, Knupfer C, Konig M, Lee D, Lloret-Villas A, Mandrik N, Medley JK, Moreau B, Naderi-Meshkin H, Palaniappan SK, Priego-Espinosa D, Scharm M, Sharma M, Smallbone K, Stanford NJ, Song JH, Theile T, Tokic M, Tomar N, Toure V, Uhlendorf J, Varusai TM, Watanabe LH, Wendland F, Wolfien M, Yurkovich JT, Zhu Y, Zardilis A, Zhukova A, Schreiber F. Waltemath D, et al. Among authors: burke pe. IEEE Trans Biomed Eng. 2016 Oct;63(10):2007-14. doi: 10.1109/TBME.2016.2560762. Epub 2016 Jun 10. IEEE Trans Biomed Eng. 2016. PMID: 27305665 Free PMC article.
57 results