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A new summarization method for Affymetrix probe level data.
Hochreiter S, Clevert DA, Obermayer K. Hochreiter S, et al. Among authors: clevert da. Bioinformatics. 2006 Apr 15;22(8):943-9. doi: 10.1093/bioinformatics/btl033. Epub 2006 Feb 10. Bioinformatics. 2006. PMID: 16473874
FABIA: factor analysis for bicluster acquisition.
Hochreiter S, Bodenhofer U, Heusel M, Mayr A, Mitterecker A, Kasim A, Khamiakova T, Van Sanden S, Lin D, Talloen W, Bijnens L, Göhlmann HW, Shkedy Z, Clevert DA. Hochreiter S, et al. Among authors: clevert da. Bioinformatics. 2010 Jun 15;26(12):1520-7. doi: 10.1093/bioinformatics/btq227. Epub 2010 Apr 23. Bioinformatics. 2010. PMID: 20418340 Free PMC article.
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures.
Munro SA, Lund SP, Pine PS, Binder H, Clevert DA, Conesa A, Dopazo J, Fasold M, Hochreiter S, Hong H, Jafari N, Kreil DP, Łabaj PP, Li S, Liao Y, Lin SM, Meehan J, Mason CE, Santoyo-Lopez J, Setterquist RA, Shi L, Shi W, Smyth GK, Stralis-Pavese N, Su Z, Tong W, Wang C, Wang J, Xu J, Ye Z, Yang Y, Yu Y, Salit M. Munro SA, et al. Among authors: clevert da. Nat Commun. 2014 Sep 25;5:5125. doi: 10.1038/ncomms6125. Nat Commun. 2014. PMID: 25254650 Free article.
Rectified factor networks for biclustering of omics data.
Clevert DA, Unterthiner T, Povysil G, Hochreiter S. Clevert DA, et al. Bioinformatics. 2017 Jul 15;33(14):i59-i66. doi: 10.1093/bioinformatics/btx226. Bioinformatics. 2017. PMID: 28881961 Free PMC article.
Artificial Intelligence Meets Toxicology.
Tetko IV, Klambauer G, Clevert DA, Shah I, Benfenati E. Tetko IV, et al. Among authors: clevert da. Chem Res Toxicol. 2022 Aug 15;35(8):1289-1290. doi: 10.1021/acs.chemrestox.2c00196. Chem Res Toxicol. 2022. PMID: 35965447 Free PMC article. No abstract available.
353 results