Daly DS - Search Results

1

MASIC: a software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC-MS(/MS) features.

Monroe ME, Shaw JL, Daly DS, Adkins JN, Smith RD. Monroe ME, et al. Among authors: daly ds. Comput Biol Chem. 2008 Jun;32(3):215-7. doi: 10.1016/j.compbiolchem.2008.02.006. Epub 2008 Feb 26. Comput Biol Chem. 2008. PMID: 18440872 Free PMC article.

2

Mixed-effects statistical model for comparative LC-MS proteomics studies.

Daly DS, Anderson KK, Panisko EA, Purvine SO, Fang R, Monroe ME, Baker SE. Daly DS, et al. J Proteome Res. 2008 Mar;7(3):1209-17. doi: 10.1021/pr070441i. Epub 2008 Feb 6. J Proteome Res. 2008. PMID: 18251496

3

The utility of accurate mass and LC elution time information in the analysis of complex proteomes.

Norbeck AD, Monroe ME, Adkins JN, Anderson KK, Daly DS, Smith RD. Norbeck AD, et al. Among authors: daly ds. J Am Soc Mass Spectrom. 2005 Aug;16(8):1239-49. doi: 10.1016/j.jasms.2005.05.009. J Am Soc Mass Spectrom. 2005. PMID: 15979333 Free PMC article.

4

Estimating probabilities of peptide database identifications to LC-FTICR-MS observations.

Anderson KK, Monroe ME, Daly DS. Anderson KK, et al. Among authors: daly ds. Proteome Sci. 2006 Feb 24;4:1. doi: 10.1186/1477-5956-4-1. Proteome Sci. 2006. PMID: 16504106 Free PMC article.

5

The effects of shared peptides on protein quantitation in label-free proteomics by LC/MS/MS.

Jin S, Daly DS, Springer DL, Miller JH. Jin S, et al. Among authors: daly ds. J Proteome Res. 2008 Jan;7(1):164-9. doi: 10.1021/pr0704175. Epub 2007 Nov 15. J Proteome Res. 2008. PMID: 18001079

6

Statistically inferring protein-protein associations with affinity isolation LC-MS/MS assays.

Sharp JL, Anderson KK, Hurst GB, Daly DS, Pelletier DA, Cannon WR, Auberry DL, Schmoyer DD, McDonald WH, White AM, Hooker BS, Victry KD, Buchanan MV, Kery V, Wiley HS. Sharp JL, et al. Among authors: daly ds. J Proteome Res. 2007 Sep;6(9):3788-95. doi: 10.1021/pr0701106. Epub 2007 Aug 11. J Proteome Res. 2007. PMID: 17691832

7

An analysis pipeline for the inference of protein-protein interaction networks.

Taylor RC, Singhal M, Daly DS, Gilmore J, Cannon WR, Domico K, White AM, Auberry DL, Auberry KJ, Hooker BS, Hurst G, McDermott JE, McDonald WH, Pelletier DA, Schmoyer D, Wiley HS. Taylor RC, et al. Among authors: daly ds. Int J Data Min Bioinform. 2009;3(4):409-30. doi: 10.1504/ijdmb.2009.029204. Int J Data Min Bioinform. 2009. PMID: 20052905

8

A Bayesian estimator of protein-protein association probabilities.

Gilmore JM, Auberry DL, Sharp JL, White AM, Anderson KK, Daly DS. Gilmore JM, et al. Among authors: daly ds. Bioinformatics. 2008 Jul 1;24(13):1554-5. doi: 10.1093/bioinformatics/btn238. Epub 2008 May 22. Bioinformatics. 2008. PMID: 18499697

9

Analysis of high-throughput ELISA microarray data.

White AM, Daly DS, Zangar RC. White AM, et al. Among authors: daly ds. Methods Mol Biol. 2011;694:191-211. doi: 10.1007/978-1-60761-977-2_13. Methods Mol Biol. 2011. PMID: 21082436

10

Platelet proteome changes associated with diabetes and during platelet storage for transfusion.

Springer DL, Miller JH, Spinelli SL, Pasa-Tolic L, Purvine SO, Daly DS, Zangar RC, Jin S, Blumberg N, Francis CW, Taubman MB, Casey AE, Wittlin SD, Phipps RP. Springer DL, et al. Among authors: daly ds. J Proteome Res. 2009 May;8(5):2261-72. doi: 10.1021/pr800885j. J Proteome Res. 2009. PMID: 19267493 Free PMC article.

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