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The role of metadata in reproducible computational research.
Patterns (N Y). 2021 Sep 10;2(9):100322. doi: 10.1016/j.patter.2021.100322. eCollection 2021 Sep 10.
Patterns (N Y). 2021.
PMID: 34553169
Free PMC article.
Review.
Ten simple rules for writing Dockerfiles for reproducible data science.
Nüst D, Sochat V, Marwick B, Eglen SJ, Head T, Hirst T, Evans BD.
Nüst D, et al.
PLoS Comput Biol. 2020 Nov 10;16(11):e1008316. doi: 10.1371/journal.pcbi.1008316. eCollection 2020 Nov.
PLoS Comput Biol. 2020.
PMID: 33170857
Free PMC article.
Item in Clipboard
Publishing computational research - a review of infrastructures for reproducible and transparent scholarly communication.
Konkol M, Nüst D, Goulier L.
Konkol M, et al. Among authors: nust d.
Res Integr Peer Rev. 2020 Jul 14;5:10. doi: 10.1186/s41073-020-00095-y. eCollection 2020.
Res Integr Peer Rev. 2020.
PMID: 32685199
Free PMC article.
Review.
Item in Clipboard
Observing many researchers using the same data and hypothesis reveals a hidden universe of uncertainty.
Breznau N, Rinke EM, Wuttke A, Nguyen HHV, Adem M, Adriaans J, Alvarez-Benjumea A, Andersen HK, Auer D, Azevedo F, Bahnsen O, Balzer D, Bauer G, Bauer PC, Baumann M, Baute S, Benoit V, Bernauer J, Berning C, Berthold A, Bethke FS, Biegert T, Blinzler K, Blumenberg JN, Bobzien L, Bohman A, Bol T, Bostic A, Brzozowska Z, Burgdorf K, Burger K, Busch KB, Carlos-Castillo J, Chan N, Christmann P, Connelly R, Czymara CS, Damian E, Ecker A, Edelmann A, Eger MA, Ellerbrock S, Forke A, Forster A, Gaasendam C, Gavras K, Gayle V, Gessler T, Gnambs T, Godefroidt A, Grömping M, Groß M, Gruber S, Gummer T, Hadjar A, Heisig JP, Hellmeier S, Heyne S, Hirsch M, Hjerm M, Hochman O, Hövermann A, Hunger S, Hunkler C, Huth N, Ignácz ZS, Jacobs L, Jacobsen J, Jaeger B, Jungkunz S, Jungmann N, Kauff M, Kleinert M, Klinger J, Kolb JP, Kołczyńska M, Kuk J, Kunißen K, Kurti Sinatra D, Langenkamp A, Lersch PM, Löbel LM, Lutscher P, Mader M, Madia JE, Malancu N, Maldonado L, Marahrens H, Martin N, Martinez P, Mayerl J, Mayorga OJ, McManus P, McWagner K, Meeusen C, Meierrieks D, Mellon J, Merhout F, Merk S, Meyer D, Micheli L, Mijs J, Moya C, Neunhoeffer M, Nüst D, Nygård O, Ochsenfeld F, Otte G, Pechen…
See abstract for full author list ➔
Breznau N, et al. Among authors: nust d.
Proc Natl Acad Sci U S A. 2022 Nov;119(44):e2203150119. doi: 10.1073/pnas.2203150119. Epub 2022 Oct 28.
Proc Natl Acad Sci U S A. 2022.
PMID: 36306328
Free PMC article.
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CODECHECK: an Open Science initiative for the independent execution of computations underlying research articles during peer review to improve reproducibility.
Nüst D, Eglen SJ.
Nüst D, et al.
F1000Res. 2021 Mar 30;10:253. doi: 10.12688/f1000research.51738.2. eCollection 2021.
F1000Res. 2021.
PMID: 34367614
Free PMC article.
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Reproducible research and GIScience: an evaluation using AGILE conference papers.
Nüst D, Granell C, Hofer B, Konkol M, Ostermann FO, Sileryte R, Cerutti V.
Nüst D, et al.
PeerJ. 2018 Jul 13;6:e5072. doi: 10.7717/peerj.5072. eCollection 2018.
PeerJ. 2018.
PMID: 30013826
Free PMC article.
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Semantically-enabled sensor plug & play for the sensor web.
Bröring A, Maúe P, Janowicz K, Nüst D, Malewski C.
Bröring A, et al. Among authors: nust d.
Sensors (Basel). 2011;11(8):7568-605. doi: 10.3390/s110807568. Epub 2011 Aug 2.
Sensors (Basel). 2011.
PMID: 22164033
Free PMC article.
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