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ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity.
Xu T, Park SK, Venable JD, Wohlschlegel JA, Diedrich JK, Cociorva D, Lu B, Liao L, Hewel J, Han X, Wong CCL, Fonslow B, Delahunty C, Gao Y, Shah H, Yates JR 3rd. Xu T, et al. Among authors: delahunty c. J Proteomics. 2015 Nov 3;129:16-24. doi: 10.1016/j.jprot.2015.07.001. Epub 2015 Jul 11. J Proteomics. 2015. PMID: 26171723 Free PMC article.
Protein identification using 2D-LC-MS/MS.
Delahunty C, Yates JR 3rd. Delahunty C, et al. Methods. 2005 Mar;35(3):248-55. doi: 10.1016/j.ymeth.2004.08.016. Epub 2005 Jan 12. Methods. 2005. PMID: 15722221
Toward objective evaluation of proteomic algorithms.
Yates JR 3rd, Park SK, Delahunty CM, Xu T, Savas JN, Cociorva D, Carvalho PC. Yates JR 3rd, et al. Nat Methods. 2012 Apr 27;9(5):455-6. doi: 10.1038/nmeth.1983. Nat Methods. 2012. PMID: 22543378 Free PMC article. No abstract available.
Census 2: isobaric labeling data analysis.
Park SK, Aslanian A, McClatchy DB, Han X, Shah H, Singh M, Rauniyar N, Moresco JJ, Pinto AF, Diedrich JK, Delahunty C, Yates JR 3rd. Park SK, et al. Among authors: delahunty c. Bioinformatics. 2014 Aug 1;30(15):2208-9. doi: 10.1093/bioinformatics/btu151. Epub 2014 Mar 28. Bioinformatics. 2014. PMID: 24681903 Free PMC article.
Global site-specific analysis of glycoprotein N-glycan processing.
Cao L, Diedrich JK, Ma Y, Wang N, Pauthner M, Park SR, Delahunty CM, McLellan JS, Burton DR, Yates JR, Paulson JC. Cao L, et al. Among authors: delahunty cm. Nat Protoc. 2018 Jun;13(6):1196-1212. doi: 10.1038/nprot.2018.024. Epub 2018 May 3. Nat Protoc. 2018. PMID: 29725121 Free PMC article.
Global site-specific N-glycosylation analysis of HIV envelope glycoprotein.
Cao L, Diedrich JK, Kulp DW, Pauthner M, He L, Park SR, Sok D, Su CY, Delahunty CM, Menis S, Andrabi R, Guenaga J, Georgeson E, Kubitz M, Adachi Y, Burton DR, Schief WR, Yates JR III, Paulson JC. Cao L, et al. Among authors: delahunty cm. Nat Commun. 2017 Mar 28;8:14954. doi: 10.1038/ncomms14954. Nat Commun. 2017. PMID: 28348411 Free PMC article.
80 results