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Software tools for single-cell tracking and quantification of cellular and molecular properties.
Nat Biotechnol. 2016 Jul 12;34(7):703-6. doi: 10.1038/nbt.3626.
Nat Biotechnol. 2016.
PMID: 27404877
No abstract available.
MCA: Multiresolution Correlation Analysis, a graphical tool for subpopulation identification in single-cell gene expression data.
Feigelman J, Theis FJ, Marr C.
Feigelman J, et al.
BMC Bioinformatics. 2014 Jul 11;15:240. doi: 10.1186/1471-2105-15-240.
BMC Bioinformatics. 2014.
PMID: 25015590
Free PMC article.
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Network plasticity of pluripotency transcription factors in embryonic stem cells.
Filipczyk A, Marr C, Hastreiter S, Feigelman J, Schwarzfischer M, Hoppe PS, Loeffler D, Kokkaliaris KD, Endele M, Schauberger B, Hilsenbeck O, Skylaki S, Hasenauer J, Anastassiadis K, Theis FJ, Schroeder T.
Filipczyk A, et al.
Nat Cell Biol. 2015 Oct;17(10):1235-46. doi: 10.1038/ncb3237. Epub 2015 Sep 21.
Nat Cell Biol. 2015.
PMID: 26389663
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Inference of spatiotemporal effects on cellular state transitions from time-lapse microscopy.
Strasser MK, Feigelman J, Theis FJ, Marr C.
Strasser MK, et al.
BMC Syst Biol. 2015 Sep 21;9:61. doi: 10.1186/s12918-015-0208-5.
BMC Syst Biol. 2015.
PMID: 26391569
Free PMC article.
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Analysis of Cell Lineage Trees by Exact Bayesian Inference Identifies Negative Autoregulation of Nanog in Mouse Embryonic Stem Cells.
Feigelman J, Ganscha S, Hastreiter S, Schwarzfischer M, Filipczyk A, Schroeder T, Theis FJ, Marr C, Claassen M.
Feigelman J, et al.
Cell Syst. 2016 Nov 23;3(5):480-490.e13. doi: 10.1016/j.cels.2016.11.001.
Cell Syst. 2016.
PMID: 27883891
Free article.
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Combinatorial Histone Acetylation Patterns Are Generated by Motif-Specific Reactions.
Blasi T, Feller C, Feigelman J, Hasenauer J, Imhof A, Theis FJ, Becker PB, Marr C.
Blasi T, et al.
Cell Syst. 2016 Jan 27;2(1):49-58. doi: 10.1016/j.cels.2016.01.002. Epub 2016 Jan 27.
Cell Syst. 2016.
PMID: 27136689
Free article.
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