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Analyzing causal relationships in proteomic profiles using CausalPath.
STAR Protoc. 2021 Nov 23;2(4):100955. doi: 10.1016/j.xpro.2021.100955. eCollection 2021 Dec 17.
STAR Protoc. 2021.
PMID: 34877547
Free PMC article.
Author-sourced capture of pathway knowledge in computable form using Biofactoid.
Wong JV, Franz M, Siper MC, Fong D, Durupinar F, Dallago C, Luna A, Giorgi J, Rodchenkov I, Babur Ö, Bachman JA, Gyori BM, Demir E, Bader GD, Sander C.
Wong JV, et al. Among authors: durupinar f.
Elife. 2021 Dec 3;10:e68292. doi: 10.7554/eLife.68292.
Elife. 2021.
PMID: 34860157
Free PMC article.
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Causal interactions from proteomic profiles: Molecular data meet pathway knowledge.
Babur Ö, Luna A, Korkut A, Durupinar F, Siper MC, Dogrusoz U, Vaca Jacome AS, Peckner R, Christianson KE, Jaffe JD, Spellman PT, Aslan JE, Sander C, Demir E.
Babur Ö, et al. Among authors: durupinar f.
Patterns (N Y). 2021 May 12;2(6):100257. doi: 10.1016/j.patter.2021.100257. eCollection 2021 Jun 11.
Patterns (N Y). 2021.
PMID: 34179843
Free PMC article.
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Psychological Parameters for Crowd Simulation: From Audiences to Mobs.
Durupinar F, Gudukbay U, Aman A, Badler NI.
Durupinar F, et al.
IEEE Trans Vis Comput Graph. 2016 Sep;22(9):2145-59. doi: 10.1109/TVCG.2015.2501801. Epub 2015 Nov 19.
IEEE Trans Vis Comput Graph. 2016.
PMID: 26595922
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