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Microscopy-Based Chromosome Conformation Capture Enables Simultaneous Visualization of Genome Organization and Transcription in Intact Organisms.
Mol Cell. 2019 Apr 4;74(1):212-222.e5. doi: 10.1016/j.molcel.2019.01.011. Epub 2019 Feb 19.
Mol Cell. 2019.
PMID: 30795893
Free article.
TADs are 3D structural units of higher-order chromosome organization in Drosophila.
Szabo Q, Jost D, Chang JM, Cattoni DI, Papadopoulos GL, Bonev B, Sexton T, Gurgo J, Jacquier C, Nollmann M, Bantignies F, Cavalli G.
Szabo Q, et al. Among authors: gurgo j.
Sci Adv. 2018 Feb 28;4(2):eaar8082. doi: 10.1126/sciadv.aar8082. eCollection 2018 Feb.
Sci Adv. 2018.
PMID: 29503869
Free PMC article.
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Direct and simultaneous observation of transcription and chromosome architecture in single cells with Hi-M.
Cardozo Gizzi AM, Espinola SM, Gurgo J, Houbron C, Fiche JB, Cattoni DI, Nollmann M.
Cardozo Gizzi AM, et al. Among authors: gurgo j.
Nat Protoc. 2020 Mar;15(3):840-876. doi: 10.1038/s41596-019-0269-9. Epub 2020 Jan 22.
Nat Protoc. 2020.
PMID: 31969721
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3D chromatin interactions involving Drosophila insulators are infrequent but preferential and arise before TADs and transcription.
Messina O, Raynal F, Gurgo J, Fiche JB, Pancaldi V, Nollmann M.
Messina O, et al. Among authors: gurgo j.
Nat Commun. 2023 Oct 21;14(1):6678. doi: 10.1038/s41467-023-42485-y.
Nat Commun. 2023.
PMID: 37865700
Free PMC article.
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Multiplexed chromatin imaging reveals predominantly pairwise long-range coordination between Drosophila Polycomb genes.
Gurgo J, Walter JC, Fiche JB, Houbron C, Schaeffer M, Cavalli G, Bantignies F, Nollmann M.
Gurgo J, et al.
Cell Rep. 2024 Apr 30;43(5):114167. doi: 10.1016/j.celrep.2024.114167. Online ahead of print.
Cell Rep. 2024.
PMID: 38691452
Free article.
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pyHiM: a new open-source, multi-platform software package for spatial genomics based on multiplexed DNA-FISH imaging.
Devos X, Fiche JB, Bardou M, Messina O, Houbron C, Gurgo J, Schaeffer M, Götz M, Walter T, Mueller F, Nollmann M.
Devos X, et al. Among authors: gurgo j.
Genome Biol. 2024 Feb 13;25(1):47. doi: 10.1186/s13059-024-03178-x.
Genome Biol. 2024.
PMID: 38351149
Free PMC article.
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