Gygi SP - Search Results

1

Intensity-based protein identification by machine learning from a library of tandem mass spectra.

Elias JE, Gibbons FD, King OD, Roth FP, Gygi SP. Elias JE, et al. Among authors: gygi sp. Nat Biotechnol. 2004 Feb;22(2):214-9. doi: 10.1038/nbt930. Epub 2004 Jan 18. Nat Biotechnol. 2004. PMID: 14730315

2

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome.

Peng J, Elias JE, Thoreen CC, Licklider LJ, Gygi SP. Peng J, et al. Among authors: gygi sp. J Proteome Res. 2003 Jan-Feb;2(1):43-50. doi: 10.1021/pr025556v. J Proteome Res. 2003. PMID: 12643542

3

A proteomics approach to understanding protein ubiquitination.

Peng J, Schwartz D, Elias JE, Thoreen CC, Cheng D, Marsischky G, Roelofs J, Finley D, Gygi SP. Peng J, et al. Among authors: gygi sp. Nat Biotechnol. 2003 Aug;21(8):921-6. doi: 10.1038/nbt849. Epub 2003 Jul 20. Nat Biotechnol. 2003. PMID: 12872131

4

SILVER helps assign peptides to tandem mass spectra using intensity-based scoring.

Gibbons FD, Elias JE, Gygi SP, Roth FP. Gibbons FD, et al. Among authors: gygi sp. J Am Soc Mass Spectrom. 2004 Jun;15(6):910-2. doi: 10.1016/j.jasms.2004.02.011. J Am Soc Mass Spectrom. 2004. PMID: 15144981 Free article.

5

Large-scale characterization of HeLa cell nuclear phosphoproteins.

Beausoleil SA, Jedrychowski M, Schwartz D, Elias JE, Villén J, Li J, Cohn MA, Cantley LC, Gygi SP. Beausoleil SA, et al. Among authors: gygi sp. Proc Natl Acad Sci U S A. 2004 Aug 17;101(33):12130-5. doi: 10.1073/pnas.0404720101. Epub 2004 Aug 9. Proc Natl Acad Sci U S A. 2004. PMID: 15302935 Free PMC article.

6

Characterization of mouse spleen cells by subtractive proteomics.

Dieguez-Acuna FJ, Gerber SA, Kodama S, Elias JE, Beausoleil SA, Faustman D, Gygi SP. Dieguez-Acuna FJ, et al. Among authors: gygi sp. Mol Cell Proteomics. 2005 Oct;4(10):1459-70. doi: 10.1074/mcp.M500137-MCP200. Epub 2005 Jul 21. Mol Cell Proteomics. 2005. PMID: 16037072 Free article.

7

Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations.

Elias JE, Haas W, Faherty BK, Gygi SP. Elias JE, et al. Among authors: gygi sp. Nat Methods. 2005 Sep;2(9):667-75. doi: 10.1038/nmeth785. Nat Methods. 2005. PMID: 16118637

8

An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets.

Schwartz D, Gygi SP. Schwartz D, et al. Among authors: gygi sp. Nat Biotechnol. 2005 Nov;23(11):1391-8. doi: 10.1038/nbt1146. Nat Biotechnol. 2005. PMID: 16273072

9

Optimization and use of peptide mass measurement accuracy in shotgun proteomics.

Haas W, Faherty BK, Gerber SA, Elias JE, Beausoleil SA, Bakalarski CE, Li X, Villén J, Gygi SP. Haas W, et al. Among authors: gygi sp. Mol Cell Proteomics. 2006 Jul;5(7):1326-37. doi: 10.1074/mcp.M500339-MCP200. Epub 2006 Apr 23. Mol Cell Proteomics. 2006. PMID: 16635985 Free article.

10

Enhanced analysis of metastatic prostate cancer using stable isotopes and high mass accuracy instrumentation.

Everley PA, Bakalarski CE, Elias JE, Waghorne CG, Beausoleil SA, Gerber SA, Faherty BK, Zetter BR, Gygi SP. Everley PA, et al. Among authors: gygi sp. J Proteome Res. 2006 May;5(5):1224-31. doi: 10.1021/pr0504891. J Proteome Res. 2006. PMID: 16674112

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