Genomic landscape of platinum resistant and sensitive testicular cancers

Nat Commun. 2020 May 4;11(1):2189. doi: 10.1038/s41467-020-15768-x.

Abstract

While most testicular germ cell tumours (TGCTs) exhibit exquisite sensitivity to platinum chemotherapy, ~10% are platinum resistant. To gain insight into the underlying mechanisms, we undertake whole exome sequencing and copy number analysis in 40 tumours from 26 cases with platinum-resistant TGCT, and combine this with published genomic data on an additional 624 TGCTs. We integrate analyses for driver mutations, mutational burden, global, arm-level and focal copy number (CN) events, and SNV and CN signatures. Albeit preliminary and observational in nature, these analyses provide support for a possible mechanistic link between early driver mutations in RAS and KIT and the widespread copy number events by which TGCT is characterised.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Copy Number Variations
  • Drug Resistance, Neoplasm / drug effects*
  • Exome Sequencing / methods
  • Genetic Predisposition to Disease / genetics
  • Genomics / methods*
  • Humans
  • Male
  • Mutation
  • Neoplasms, Germ Cell and Embryonal / drug therapy*
  • Neoplasms, Germ Cell and Embryonal / genetics
  • Neoplasms, Germ Cell and Embryonal / metabolism
  • Organoplatinum Compounds / therapeutic use
  • Platinum / therapeutic use*
  • Proto-Oncogene Proteins c-kit / genetics
  • Proto-Oncogene Proteins c-kit / metabolism
  • Signal Transduction / genetics
  • Testicular Neoplasms / drug therapy*
  • Testicular Neoplasms / genetics
  • Testicular Neoplasms / metabolism
  • ras Proteins / genetics
  • ras Proteins / metabolism

Substances

  • Organoplatinum Compounds
  • Platinum
  • Proto-Oncogene Proteins c-kit
  • ras Proteins

Supplementary concepts

  • Testicular Germ Cell Tumor