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RNA-Seq analysis in MeV.
Howe EA, Sinha R, Schlauch D, Quackenbush J. Howe EA, et al. Bioinformatics. 2011 Nov 15;27(22):3209-10. doi: 10.1093/bioinformatics/btr490. Epub 2011 Oct 5. Bioinformatics. 2011. PMID: 21976420 Free PMC article.
iBBiG: iterative binary bi-clustering of gene sets.
Gusenleitner D, Howe EA, Bentink S, Quackenbush J, Culhane AC. Gusenleitner D, et al. Among authors: howe ea. Bioinformatics. 2012 Oct 1;28(19):2484-92. doi: 10.1093/bioinformatics/bts438. Epub 2012 Jul 12. Bioinformatics. 2012. PMID: 22789589 Free PMC article.
Therapeutic implications of GIPC1 silencing in cancer.
Chittenden TW, Pak J, Rubio R, Cheng H, Holton K, Prendergast N, Glinskii V, Cai Y, Culhane A, Bentink S, Schwede M, Mar JC, Howe EA, Aryee M, Sultana R, Lanahan AA, Taylor JM, Holmes C, Hahn WC, Zhao JJ, Iglehart JD, Quackenbush J. Chittenden TW, et al. Among authors: howe ea. PLoS One. 2010 Dec 30;5(12):e15581. doi: 10.1371/journal.pone.0015581. PLoS One. 2010. PMID: 21209904 Free PMC article.
TM4 microarray software suite.
Saeed AI, Bhagabati NK, Braisted JC, Liang W, Sharov V, Howe EA, Li J, Thiagarajan M, White JA, Quackenbush J. Saeed AI, et al. Among authors: howe ea. Methods Enzymol. 2006;411:134-93. doi: 10.1016/S0076-6879(06)11009-5. Methods Enzymol. 2006. PMID: 16939790 Review.
Physiogenomic resources for rat models of heart, lung and blood disorders.
Malek RL, Wang HY, Kwitek AE, Greene AS, Bhagabati N, Borchardt G, Cahill L, Currier T, Frank B, Fu X, Hasinoff M, Howe E, Letwin N, Luu TV, Saeed A, Sajadi H, Salzberg SL, Sultana R, Thiagarajan M, Tsai J, Veratti K, White J, Quackenbush J, Jacob HJ, Lee NH. Malek RL, et al. Nat Genet. 2006 Feb;38(2):234-9. doi: 10.1038/ng1693. Epub 2006 Jan 15. Nat Genet. 2006. PMID: 16415889
BioAssay Research Database (BARD): chemical biology and probe-development enabled by structured metadata and result types.
Howe EA, de Souza A, Lahr DL, Chatwin S, Montgomery P, Alexander BR, Nguyen DT, Cruz Y, Stonich DA, Walzer G, Rose JT, Picard SC, Liu Z, Rose JN, Xiang X, Asiedu J, Durkin D, Levine J, Yang JJ, Schürer SC, Braisted JC, Southall N, Southern MR, Chung TD, Brudz S, Tanega C, Schreiber SL, Bittker JA, Guha R, Clemons PA. Howe EA, et al. Nucleic Acids Res. 2015 Jan;43(Database issue):D1163-70. doi: 10.1093/nar/gku1244. Epub 2014 Dec 4. Nucleic Acids Res. 2015. PMID: 25477388 Free PMC article.
16 results