Ideker T - Search Results

1

Systematic interpretation of genetic interactions using protein networks.

Kelley R, Ideker T. Kelley R, et al. Among authors: ideker t. Nat Biotechnol. 2005 May;23(5):561-6. doi: 10.1038/nbt1096. Nat Biotechnol. 2005. PMID: 15877074 Free PMC article.

2

Global architecture of genetic interactions on the protein network.

Ozier O, Amin N, Ideker T. Ozier O, et al. Among authors: ideker t. Nat Biotechnol. 2003 May;21(5):490-1. doi: 10.1038/nbt0503-490. Nat Biotechnol. 2003. PMID: 12721566 No abstract available.

3

Integrating phenotypic and expression profiles to map arsenic-response networks.

Haugen AC, Kelley R, Collins JB, Tucker CJ, Deng C, Afshari CA, Brown JM, Ideker T, Van Houten B. Haugen AC, et al. Among authors: ideker t. Genome Biol. 2004;5(12):R95. doi: 10.1186/gb-2004-5-12-r95. Epub 2004 Nov 29. Genome Biol. 2004. PMID: 15575969 Free PMC article.

4

Conserved patterns of protein interaction in multiple species.

Sharan R, Suthram S, Kelley RM, Kuhn T, McCuine S, Uetz P, Sittler T, Karp RM, Ideker T. Sharan R, et al. Among authors: ideker t. Proc Natl Acad Sci U S A. 2005 Feb 8;102(6):1974-9. doi: 10.1073/pnas.0409522102. Epub 2005 Feb 1. Proc Natl Acad Sci U S A. 2005. PMID: 15687504 Free PMC article.

5

The Plasmodium protein network diverges from those of other eukaryotes.

Suthram S, Sittler T, Ideker T. Suthram S, et al. Among authors: ideker t. Nature. 2005 Nov 3;438(7064):108-12. doi: 10.1038/nature04135. Nature. 2005. PMID: 16267557 Free PMC article.

6

Systematic identification of functional orthologs based on protein network comparison.

Bandyopadhyay S, Sharan R, Ideker T. Bandyopadhyay S, et al. Among authors: ideker t. Genome Res. 2006 Mar;16(3):428-35. doi: 10.1101/gr.4526006. Genome Res. 2006. PMID: 16510899 Free PMC article.

7

Efficient algorithms for detecting signaling pathways in protein interaction networks.

Scott J, Ideker T, Karp RM, Sharan R. Scott J, et al. Among authors: ideker t. J Comput Biol. 2006 Mar;13(2):133-44. doi: 10.1089/cmb.2006.13.133. J Comput Biol. 2006. PMID: 16597231

8

Modeling cellular machinery through biological network comparison.

Sharan R, Ideker T. Sharan R, et al. Among authors: ideker t. Nat Biotechnol. 2006 Apr;24(4):427-33. doi: 10.1038/nbt1196. Nat Biotechnol. 2006. PMID: 16601728 Review.

9

A systems approach to mapping DNA damage response pathways.

Workman CT, Mak HC, McCuine S, Tagne JB, Agarwal M, Ozier O, Begley TJ, Samson LD, Ideker T. Workman CT, et al. Among authors: ideker t. Science. 2006 May 19;312(5776):1054-9. doi: 10.1126/science.1122088. Science. 2006. PMID: 16709784 Free PMC article.

10

Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae.

Reguly T, Breitkreutz A, Boucher L, Breitkreutz BJ, Hon GC, Myers CL, Parsons A, Friesen H, Oughtred R, Tong A, Stark C, Ho Y, Botstein D, Andrews B, Boone C, Troyanskya OG, Ideker T, Dolinski K, Batada NN, Tyers M. Reguly T, et al. Among authors: ideker t. J Biol. 2006;5(4):11. doi: 10.1186/jbiol36. Epub 2006 Jun 8. J Biol. 2006. PMID: 16762047 Free PMC article.

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