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Year Number of Results
2011 1
2014 3
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2016 1
2018 1
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2020 3
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2023 2
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Page 1
TADs without borders.
Farabella I, Marti-Renom MA. Farabella I, et al. Nat Genet. 2020 Aug;52(8):752-753. doi: 10.1038/s41588-020-0670-x. Nat Genet. 2020. PMID: 32747821 No abstract available.
Chromatin alternates between A and B compartments at kilobase scale for subgenic organization.
Harris HL, Gu H, Olshansky M, Wang A, Farabella I, Eliaz Y, Kalluchi A, Krishna A, Jacobs M, Cauer G, Pham M, Rao SSP, Dudchenko O, Omer A, Mohajeri K, Kim S, Nichols MH, Davis ES, Gkountaroulis D, Udupa D, Aiden AP, Corces VG, Phanstiel DH, Noble WS, Nir G, Di Pierro M, Seo JS, Talkowski ME, Aiden EL, Rowley MJ. Harris HL, et al. Among authors: farabella i. Nat Commun. 2023 Jun 6;14(1):3303. doi: 10.1038/s41467-023-38429-1. Nat Commun. 2023. PMID: 37280210 Free PMC article.
Genome-wide tracing to decipher nuclear organization.
Flores V, Farabella I, Nir G. Flores V, et al. Among authors: farabella i. Curr Opin Cell Biol. 2023 Jun;82:102175. doi: 10.1016/j.ceb.2023.102175. Epub 2023 May 30. Curr Opin Cell Biol. 2023. PMID: 37263058 Review.
Three-dimensional genome organization via triplex-forming RNAs.
Farabella I, Di Stefano M, Soler-Vila P, Marti-Marimon M, Marti-Renom MA. Farabella I, et al. Nat Struct Mol Biol. 2021 Nov;28(11):945-954. doi: 10.1038/s41594-021-00678-3. Epub 2021 Nov 10. Nat Struct Mol Biol. 2021. PMID: 34759378
MED27, SLC6A7, and MPPE1 Variants in a Complex Neurodevelopmental Disorder with Severe Dystonia.
Reid KM, Spaull R, Salian S, Barwick K, Meyer E, Zhen J, Hirata H, Sheipouri D, Benkerroum H, Gorman KM, Papandreou A, Simpson MA, Hirano Y, Farabella I, Topf M, Grozeva D, Carss K, Smith M, Pall H, Lunt P, De Gressi S, Kamsteeg EJ, Haack TB, Carr L, Guerreiro R, Bras J, Maher ER, Scott RH, Vandenberg RJ, Raymond FL, Chong WK, Sudhakar S, Mankad K, Reith ME, Campeau PM, Harvey RJ, Kurian MA. Reid KM, et al. Among authors: farabella i. Mov Disord. 2022 Oct;37(10):2139-2146. doi: 10.1002/mds.29147. Epub 2022 Jul 25. Mov Disord. 2022. PMID: 35876425 Free PMC article.
Hierarchical chromatin organization detected by TADpole.
Soler-Vila P, Cuscó P, Farabella I, Di Stefano M, Marti-Renom MA. Soler-Vila P, et al. Among authors: farabella i. Nucleic Acids Res. 2020 Apr 17;48(7):e39. doi: 10.1093/nar/gkaa087. Nucleic Acids Res. 2020. PMID: 32083658 Free PMC article.
3D reconstruction of genomic regions from sparse interaction data.
Mendieta-Esteban J, Di Stefano M, Castillo D, Farabella I, Marti-Renom MA. Mendieta-Esteban J, et al. Among authors: farabella i. NAR Genom Bioinform. 2021 Mar 22;3(1):lqab017. doi: 10.1093/nargab/lqab017. eCollection 2021 Mar. NAR Genom Bioinform. 2021. PMID: 33778492 Free PMC article.
Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation.
Vilarrasa-Blasi R, Soler-Vila P, Verdaguer-Dot N, Russiñol N, Di Stefano M, Chapaprieta V, Clot G, Farabella I, Cuscó P, Kulis M, Agirre X, Prosper F, Beekman R, Beà S, Colomer D, Stunnenberg HG, Gut I, Campo E, Marti-Renom MA, Martin-Subero JI. Vilarrasa-Blasi R, et al. Among authors: farabella i. Nat Commun. 2021 Jan 28;12(1):651. doi: 10.1038/s41467-020-20849-y. Nat Commun. 2021. PMID: 33510161 Free PMC article.
Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling.
Nir G, Farabella I, Pérez Estrada C, Ebeling CG, Beliveau BJ, Sasaki HM, Lee SD, Nguyen SC, McCole RB, Chattoraj S, Erceg J, AlHaj Abed J, Martins NMC, Nguyen HQ, Hannan MA, Russell S, Durand NC, Rao SSP, Kishi JY, Soler-Vila P, Di Pierro M, Onuchic JN, Callahan SP, Schreiner JM, Stuckey JA, Yin P, Aiden EL, Marti-Renom MA, Wu CT. Nir G, et al. Among authors: farabella i. PLoS Genet. 2018 Dec 26;14(12):e1007872. doi: 10.1371/journal.pgen.1007872. eCollection 2018 Dec. PLoS Genet. 2018. PMID: 30586358 Free PMC article.
21 results