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Detecting molecular subtypes from multi-omics datasets using SUMO.
Sienkiewicz K, Chen J, Chatrath A, Lawson JT, Sheffield NC, Zhang L, Ratan A. Sienkiewicz K, et al. Cell Rep Methods. 2022 Jan 24;2(1):100152. doi: 10.1016/j.crmeth.2021.100152. Epub 2022 Jan 14. Cell Rep Methods. 2022. PMID: 35211690 Free PMC article.
Genome Sequence of the Yeast Saprochaete ingens CBS 517.90.
Hodorová V, Lichancová H, Zubenko S, Sienkiewicz K, Penir SMU, Afanasyev P, Boceck D, Bonnin S, Hakobyan S, Smyczynska U, Zhivkoplias E, Zlatohurska M, Tralle E, Frolova A, Pryszcz LP, Brejová B, Vinař T, Nosek J. Hodorová V, et al. Among authors: sienkiewicz k. Microbiol Resour Announc. 2019 Dec 12;8(50):e01366-19. doi: 10.1128/MRA.01366-19. Microbiol Resour Announc. 2019. PMID: 31831616 Free PMC article.
Mapping chromatin accessibility and active regulatory elements reveals pathological mechanisms in human gliomas.
Stępniak K, Machnicka MA, Mieczkowski J, Macioszek A, Wojtaś B, Gielniewski B, Poleszak K, Perycz M, Król SK, Guzik R, Dąbrowski MJ, Dramiński M, Jardanowska M, Grabowicz I, Dziedzic A, Kranas H, Sienkiewicz K, Diamanti K, Kotulska K, Grajkowska W, Roszkowski M, Czernicki T, Marchel A, Komorowski J, Kaminska B, Wilczyński B. Stępniak K, et al. Among authors: sienkiewicz k. Nat Commun. 2021 Jun 15;12(1):3621. doi: 10.1038/s41467-021-23922-2. Nat Commun. 2021. PMID: 34131149 Free PMC article.
Author Correction: Mapping chromatin accessibility and active regulatory elements reveals pathological mechanisms in human gliomas.
Stępniak K, Machnicka MA, Mieczkowski J, Macioszek A, Wojtaś B, Gielniewski B, Poleszak K, Perycz M, Król SK, Guzik R, Dąbrowski MJ, Dramiński M, Jardanowska M, Grabowicz I, Dziedzic A, Kranas H, Sienkiewicz K, Diamanti K, Kotulska K, Grajkowska W, Roszkowski M, Czernicki T, Marchel A, Komorowski J, Kaminska B, Wilczyński B. Stępniak K, et al. Among authors: sienkiewicz k. Nat Commun. 2021 Dec 6;12(1):7218. doi: 10.1038/s41467-021-27448-5. Nat Commun. 2021. PMID: 34873182 Free PMC article. No abstract available.
Genome Sequence of Flavor-Producing Yeast Saprochaete suaveolens NRRL Y-17571.
Lichancová H, Hodorová V, Sienkiewicz K, Penir SMU, Afanasyev P, Boceck D, Bonnin S, Hakobyan S, Krawczyk PS, Smyczynska U, Zhivkoplias E, Zlatohurska M, Odrzywolski A, Tralle E, Frolova A, Pryszcz LP, Brejová B, Vinař T, Nosek J. Lichancová H, et al. Among authors: sienkiewicz k. Microbiol Resour Announc. 2019 Feb 28;8(9):e00094-19. doi: 10.1128/MRA.00094-19. eCollection 2019 Feb. Microbiol Resour Announc. 2019. PMID: 30834381 Free PMC article.
Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight.
Garcia-Medina JS, Sienkiewicz K, Narayanan SA, Overbey EG, Grigorev K, Ryon KA, Burke M, Proszynski J, Tierney B, Schmidt CM, Mencia-Trinchant N, Klotz R, Ortiz V, Foox J, Chin C, Najjar D, Matei I, Chan I, Cruchaga C, Kleinman A, Kim J, Lucaci A, Loy C, Mzava O, De Vlaminck I, Singaraju A, Taylor LE, Schmidt JC, Schmidt MA, Blease K, Moreno J, Boddicker A, Zhao J, Lajoie B, Altomare A, Kruglyak S, Levy S, Yu M, Hassane DC, Bailey SM, Bolton K, Mateus J, Mason CE. Garcia-Medina JS, et al. Among authors: sienkiewicz k. Precis Clin Med. 2024 Apr 8;7(1):pbae007. doi: 10.1093/pcmedi/pbae007. eCollection 2024 Mar. Precis Clin Med. 2024. PMID: 38634106 Free PMC article.