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Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments.
Nat Biotechnol. 2017 Oct;35(10):969-976. doi: 10.1038/nbt.3943. Epub 2017 Sep 18.
Nat Biotechnol. 2017.
PMID: 28922347
Free PMC article.
CicArVarDB: SNP and InDel database for advancing genetics research and breeding applications in chickpea.
Doddamani D, Khan AW, Katta MA, Agarwal G, Thudi M, Ruperao P, Edwards D, Varshney RK.
Doddamani D, et al.
Database (Oxford). 2015 Aug 19;2015:bav078. doi: 10.1093/database/bav078. Print 2015.
Database (Oxford). 2015.
PMID: 26289427
Free PMC article.
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Prioritization of candidate genes in "QTL-hotspot" region for drought tolerance in chickpea (Cicer arietinum L.).
Kale SM, Jaganathan D, Ruperao P, Chen C, Punna R, Kudapa H, Thudi M, Roorkiwal M, Katta MA, Doddamani D, Garg V, Kishor PBK, Gaur PM, Nguyen HT, Batley J, Edwards D, Sutton T, Varshney RK.
Kale SM, et al.
Sci Rep. 2015 Oct 19;5:15296. doi: 10.1038/srep15296.
Sci Rep. 2015.
PMID: 26478518
Free PMC article.
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NGS-QCbox and Raspberry for Parallel, Automated and Rapid Quality Control Analysis of Large-Scale Next Generation Sequencing (Illumina) Data.
Katta MA, Khan AW, Doddamani D, Thudi M, Varshney RK.
Katta MA, et al.
PLoS One. 2015 Oct 13;10(10):e0139868. doi: 10.1371/journal.pone.0139868. eCollection 2015.
PLoS One. 2015.
PMID: 26460497
Free PMC article.
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CicArMiSatDB: the chickpea microsatellite database.
Doddamani D, Katta MA, Khan AW, Agarwal G, Shah TM, Varshney RK.
Doddamani D, et al.
BMC Bioinformatics. 2014 Jun 21;15:212. doi: 10.1186/1471-2105-15-212.
BMC Bioinformatics. 2014.
PMID: 24952649
Free PMC article.
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An integrated SNP mining and utilization (ISMU) pipeline for next generation sequencing data.
Azam S, Rathore A, Shah TM, Telluri M, Amindala B, Ruperao P, Katta MA, Varshney RK.
Azam S, et al.
PLoS One. 2014 Jul 8;9(7):e101754. doi: 10.1371/journal.pone.0101754. eCollection 2014.
PLoS One. 2014.
PMID: 25003610
Free PMC article.
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Next generation sequencing and de novo transcriptome analysis of Costus pictus D. Don, a non-model plant with potent anti-diabetic properties.
Annadurai RS, Jayakumar V, Mugasimangalam RC, Katta MA, Anand S, Gopinathan S, Sarma SP, Fernandes SJ, Mullapudi N, Murugesan S, Rao SN.
Annadurai RS, et al.
BMC Genomics. 2012 Nov 23;13:663. doi: 10.1186/1471-2164-13-663.
BMC Genomics. 2012.
PMID: 23176672
Free PMC article.
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De Novo transcriptome assembly (NGS) of Curcuma longa L. rhizome reveals novel transcripts related to anticancer and antimalarial terpenoids.
Annadurai RS, Neethiraj R, Jayakumar V, Damodaran AC, Rao SN, Katta MA, Gopinathan S, Sarma SP, Senthilkumar V, Niranjan V, Gopinath A, Mugasimangalam RC.
Annadurai RS, et al.
PLoS One. 2013;8(2):e56217. doi: 10.1371/journal.pone.0056217. Epub 2013 Feb 28.
PLoS One. 2013.
PMID: 23468859
Free PMC article.
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