Krogan NJ - Search Results

1

Dissection of DNA damage responses using multiconditional genetic interaction maps.

Guénolé A, Srivas R, Vreeken K, Wang ZZ, Wang S, Krogan NJ, Ideker T, van Attikum H. Guénolé A, et al. Among authors: krogan nj. Mol Cell. 2013 Jan 24;49(2):346-58. doi: 10.1016/j.molcel.2012.11.023. Epub 2012 Dec 27. Mol Cell. 2013. PMID: 23273983 Free PMC article.

2

Rewiring of genetic networks in response to DNA damage.

Bandyopadhyay S, Mehta M, Kuo D, Sung MK, Chuang R, Jaehnig EJ, Bodenmiller B, Licon K, Copeland W, Shales M, Fiedler D, Dutkowski J, Guénolé A, van Attikum H, Shokat KM, Kolodner RD, Huh WK, Aebersold R, Keogh MC, Krogan NJ, Ideker T. Bandyopadhyay S, et al. Among authors: krogan nj. Science. 2010 Dec 3;330(6009):1385-9. doi: 10.1126/science.1195618. Science. 2010. PMID: 21127252 Free PMC article.

3

Differential network biology.

Ideker T, Krogan NJ. Ideker T, et al. Among authors: krogan nj. Mol Syst Biol. 2012 Jan 17;8:565. doi: 10.1038/msb.2011.99. Mol Syst Biol. 2012. PMID: 22252388 Free PMC article. Review.

4

Hierarchical modularity and the evolution of genetic interactomes across species.

Ryan CJ, Roguev A, Patrick K, Xu J, Jahari H, Tong Z, Beltrao P, Shales M, Qu H, Collins SR, Kliegman JI, Jiang L, Kuo D, Tosti E, Kim HS, Edelmann W, Keogh MC, Greene D, Tang C, Cunningham P, Shokat KM, Cagney G, Svensson JP, Guthrie C, Espenshade PJ, Ideker T, Krogan NJ. Ryan CJ, et al. Among authors: krogan nj. Mol Cell. 2012 Jun 8;46(5):691-704. doi: 10.1016/j.molcel.2012.05.028. Mol Cell. 2012. PMID: 22681890 Free PMC article.

5

The cancer cell map initiative: defining the hallmark networks of cancer.

Krogan NJ, Lippman S, Agard DA, Ashworth A, Ideker T. Krogan NJ, et al. Mol Cell. 2015 May 21;58(4):690-8. doi: 10.1016/j.molcel.2015.05.008. Mol Cell. 2015. PMID: 26000852 Free PMC article. Review.

6

Genome-wide association data reveal a global map of genetic interactions among protein complexes.

Hannum G, Srivas R, Guénolé A, van Attikum H, Krogan NJ, Karp RM, Ideker T. Hannum G, et al. Among authors: krogan nj. PLoS Genet. 2009 Dec;5(12):e1000782. doi: 10.1371/journal.pgen.1000782. Epub 2009 Dec 24. PLoS Genet. 2009. PMID: 20041197 Free PMC article.

7

A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing.

Wilmes GM, Bergkessel M, Bandyopadhyay S, Shales M, Braberg H, Cagney G, Collins SR, Whitworth GB, Kress TL, Weissman JS, Ideker T, Guthrie C, Krogan NJ. Wilmes GM, et al. Among authors: krogan nj. Mol Cell. 2008 Dec 5;32(5):735-46. doi: 10.1016/j.molcel.2008.11.012. Mol Cell. 2008. PMID: 19061648 Free PMC article.

8

Improved functional overview of protein complexes using inferred epistatic relationships.

Ryan C, Greene D, Guénolé A, van Attikum H, Krogan NJ, Cunningham P, Cagney G. Ryan C, et al. Among authors: krogan nj. BMC Syst Biol. 2011 May 23;5:80. doi: 10.1186/1752-0509-5-80. BMC Syst Biol. 2011. PMID: 21605386 Free PMC article.

9

Functional maps of protein complexes from quantitative genetic interaction data.

Bandyopadhyay S, Kelley R, Krogan NJ, Ideker T. Bandyopadhyay S, et al. Among authors: krogan nj. PLoS Comput Biol. 2008 Apr 18;4(4):e1000065. doi: 10.1371/journal.pcbi.1000065. PLoS Comput Biol. 2008. PMID: 18421374 Free PMC article.

10

A gene ontology inferred from molecular networks.

Dutkowski J, Kramer M, Surma MA, Balakrishnan R, Cherry JM, Krogan NJ, Ideker T. Dutkowski J, et al. Among authors: krogan nj. Nat Biotechnol. 2013 Jan;31(1):38-45. doi: 10.1038/nbt.2463. Nat Biotechnol. 2013. PMID: 23242164 Free PMC article.

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