Li YY - Search Results

1

A computational approach to finding novel targets for existing drugs.

Li YY, An J, Jones SJ. Li YY, et al. PLoS Comput Biol. 2011 Sep;7(9):e1002139. doi: 10.1371/journal.pcbi.1002139. Epub 2011 Sep 1. PLoS Comput Biol. 2011. PMID: 21909252 Free PMC article.

2

A large-scale computational approach to drug repositioning.

Li YY, An J, Jones SJ. Li YY, et al. Genome Inform. 2006;17(2):239-47. Genome Inform. 2006. PMID: 17503396

3

Selective targeting of indel-inferred differences in spatial structures of homologous proteins.

Li YY, Jones SJ, Cherkasov A. Li YY, et al. J Bioinform Comput Biol. 2006 Apr;4(2):403-14. doi: 10.1142/s0219720006001898. J Bioinform Comput Biol. 2006. PMID: 16819791

4

Evolution of an adenocarcinoma in response to selection by targeted kinase inhibitors.

Jones SJ, Laskin J, Li YY, Griffith OL, An J, Bilenky M, Butterfield YS, Cezard T, Chuah E, Corbett R, Fejes AP, Griffith M, Yee J, Martin M, Mayo M, Melnyk N, Morin RD, Pugh TJ, Severson T, Shah SP, Sutcliffe M, Tam A, Terry J, Thiessen N, Thomson T, Varhol R, Zeng T, Zhao Y, Moore RA, Huntsman DG, Birol I, Hirst M, Holt RA, Marra MA. Jones SJ, et al. Among authors: li yy. Genome Biol. 2010;11(8):R82. doi: 10.1186/gb-2010-11-8-r82. Epub 2010 Aug 9. Genome Biol. 2010. PMID: 20696054 Free PMC article.

5

Ab initio parameterization of YFF1, a universal force field for drug-design applications.

Yakovenko OY, Li YY, Oliferenko AA, Vashchenko GM, Bdzhola VG, Jones SJ. Yakovenko OY, et al. Among authors: li yy. J Mol Model. 2012 Feb;18(2):663-73. doi: 10.1007/s00894-011-1095-3. Epub 2011 May 12. J Mol Model. 2012. PMID: 21562826

6

Drug repositioning for personalized medicine.

Li YY, Jones SJ. Li YY, et al. Genome Med. 2012 Mar 30;4(3):27. doi: 10.1186/gm326. eCollection 2012. Genome Med. 2012. PMID: 22494857 Free PMC article. Review.

7

cisRED: a database system for genome-scale computational discovery of regulatory elements.

Robertson G, Bilenky M, Lin K, He A, Yuen W, Dagpinar M, Varhol R, Teague K, Griffith OL, Zhang X, Pan Y, Hassel M, Sleumer MC, Pan W, Pleasance ED, Chuang M, Hao H, Li YY, Robertson N, Fjell C, Li B, Montgomery SB, Astakhova T, Zhou J, Sander J, Siddiqui AS, Jones SJ. Robertson G, et al. Among authors: li yy, li b. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D68-73. doi: 10.1093/nar/gkj075. Nucleic Acids Res. 2006. PMID: 16381958 Free PMC article.

8

Molecular decoy to the Y-box binding protein-1 suppresses the growth of breast and prostate cancer cells whilst sparing normal cell viability.

Law JH, Li Y, To K, Wang M, Astanehe A, Lambie K, Dhillon J, Jones SJ, Gleave ME, Eaves CJ, Dunn SE. Law JH, et al. PLoS One. 2010 Sep 10;5(9):e12661. doi: 10.1371/journal.pone.0012661. PLoS One. 2010. PMID: 20844753 Free PMC article.

9

Luteolin is a novel p90 ribosomal S6 kinase (RSK) inhibitor that suppresses Notch4 signaling by blocking the activation of Y-box binding protein-1 (YB-1).

Reipas KM, Law JH, Couto N, Islam S, Li Y, Li H, Cherkasov A, Jung K, Cheema AS, Jones SJ, Hassell JA, Dunn SE. Reipas KM, et al. Oncotarget. 2013 Feb;4(2):329-45. doi: 10.18632/oncotarget.834. Oncotarget. 2013. PMID: 23593654 Free PMC article.

10

'Inductive' charges on atoms in proteins: comparative docking with the extended steroid benchmark set and discovery of a novel SHBG ligand.

Cherkasov A, Shi Z, Li Y, Jones SJ, Fallahi M, Hammond GL. Cherkasov A, et al. J Chem Inf Model. 2005 Nov-Dec;45(6):1842-53. doi: 10.1021/ci0498158. J Chem Inf Model. 2005. PMID: 16309292

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