Homeostatic control of nuclear-encoded mitochondrial gene expression by the histone variant H2A.Z is essential for neuronal survival

Cell Rep. 2021 Sep 14;36(11):109704. doi: 10.1016/j.celrep.2021.109704.

Abstract

Histone variants are crucial regulators of chromatin structure and gene transcription, yet their functions within the brain remain largely unexplored. Here, we show that the H2A histone variant H2A.Z is essential for neuronal survival. Mice lacking H2A.Z in GABAergic neurons or Purkinje cells (PCs) present with a progressive cerebellar ataxia accompanied by widespread degeneration of PCs. Ablation of H2A.Z in other neuronal subtypes also triggers cell death. H2A.Z binds to the promoters of key nuclear-encoded mitochondrial genes to regulate their expression and promote organelle function. Bolstering mitochondrial activity genetically or by organelle transplant enhances the survival of H2A.Z-ablated neurons. Changes in bioenergetic status alter H2A.Z occupancy at the promoters of nuclear-encoded mitochondrial genes, an adaptive response essential for cell survival. Our results highlight that H2A.Z fulfills a key, conserved role in neuronal survival by acting as a transcriptional rheostat to regulate the expression of genes critical to mitochondrial function.

Keywords: H2A.Z; Purkinje cells; bioenergetics; cerebellar ataxia; epigenetics; histone variants; mitochondria; neurodegeneration; neurons.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Nucleus / metabolism*
  • Cell Survival / drug effects
  • Cells, Cultured
  • Down-Regulation
  • Fibroblasts / cytology
  • Fibroblasts / metabolism
  • GABAergic Neurons / cytology
  • GABAergic Neurons / metabolism
  • Histones / deficiency
  • Histones / genetics*
  • Histones / metabolism
  • Metformin / pharmacology
  • Mice
  • Mice, Inbred C57BL
  • Mice, Knockout
  • Mitochondria / genetics
  • Mitochondria / metabolism*
  • Mitochondrial Proteins / metabolism
  • NF-E2-Related Factor 2 / genetics
  • NF-E2-Related Factor 2 / metabolism
  • Oxidative Phosphorylation
  • Purkinje Cells / cytology
  • Purkinje Cells / metabolism
  • Transcriptome* / drug effects
  • Up-Regulation

Substances

  • H2az1 protein, mouse
  • Histones
  • Mitochondrial Proteins
  • NF-E2-Related Factor 2
  • Nfe2l2 protein, mouse
  • Metformin