Loraine AE - Search Results

1

Genome-wide characterization of differential transcript usage in Arabidopsis thaliana.

Vaneechoutte D, Estrada AR, Lin YC, Loraine AE, Vandepoele K. Vaneechoutte D, et al. Among authors: loraine ae. Plant J. 2017 Dec;92(6):1218-1231. doi: 10.1111/tpj.13746. Epub 2017 Nov 20. Plant J. 2017. PMID: 29031026 Free article.

2

RNA-seq of Arabidopsis pollen uncovers novel transcription and alternative splicing.

Loraine AE, McCormick S, Estrada A, Patel K, Qin P. Loraine AE, et al. Plant Physiol. 2013 Jun;162(2):1092-109. doi: 10.1104/pp.112.211441. Epub 2013 Apr 16. Plant Physiol. 2013. PMID: 23590974 Free PMC article.

3

Many rice genes are differentially spliced between roots and shoots but cytokinin has minimal effect on splicing.

Freese NH, Estrada AR, Blakley IC, Duan J, Loraine AE. Freese NH, et al. Among authors: loraine ae. Plant Direct. 2019 May 17;3(5):e00136. doi: 10.1002/pld3.136. eCollection 2019 May. Plant Direct. 2019. PMID: 31245776 Free PMC article.

4

Prevalence of alternative splicing choices in Arabidopsis thaliana.

English AC, Patel KS, Loraine AE. English AC, et al. Among authors: loraine ae. BMC Plant Biol. 2010 Jun 4;10:102. doi: 10.1186/1471-2229-10-102. BMC Plant Biol. 2010. PMID: 20525311 Free PMC article.

5

An 'eFP-Seq Browser' for visualizing and exploring RNA sequencing data.

Sullivan A, Purohit PK, Freese NH, Pasha A, Esteban E, Waese J, Wu A, Chen M, Chin CY, Song R, Watharkar SR, Chan AP, Krishnakumar V, Vaughn MW, Town C, Loraine AE, Provart NJ. Sullivan A, et al. Among authors: loraine ae. Plant J. 2019 Nov;100(3):641-654. doi: 10.1111/tpj.14468. Epub 2019 Aug 23. Plant J. 2019. PMID: 31350781 Free PMC article.

6

The Arabidopsis transcription factor AINTEGUMENTA orchestrates patterning genes and auxin signaling in the establishment of floral growth and form.

Krizek BA, Blakley IC, Ho YY, Freese N, Loraine AE. Krizek BA, et al. Among authors: loraine ae. Plant J. 2020 Jul;103(2):752-768. doi: 10.1111/tpj.14769. Epub 2020 May 5. Plant J. 2020. PMID: 32279407 Free PMC article.

7

Anno genominis XX: 20 years of Arabidopsis genomics.

Provart NJ, Brady SM, Parry G, Schmitz RJ, Queitsch C, Bonetta D, Waese J, Schneeberger K, Loraine AE. Provart NJ, et al. Among authors: loraine ae. Plant Cell. 2021 May 31;33(4):832-845. doi: 10.1093/plcell/koaa038. Plant Cell. 2021. PMID: 33793861 Free PMC article. Review.

8

A protocol for visual analysis of alternative splicing in RNA-Seq data using integrated genome browser.

Gulledge AA, Vora H, Patel K, Loraine AE. Gulledge AA, et al. Among authors: loraine ae. Methods Mol Biol. 2014;1158:123-37. doi: 10.1007/978-1-4939-0700-7_8. Methods Mol Biol. 2014. PMID: 24792048 Free PMC article.

9

Identification of cytokinin-responsive genes using microarray meta-analysis and RNA-Seq in Arabidopsis.

Bhargava A, Clabaugh I, To JP, Maxwell BB, Chiang YH, Schaller GE, Loraine A, Kieber JJ. Bhargava A, et al. Plant Physiol. 2013 May;162(1):272-94. doi: 10.1104/pp.113.217026. Epub 2013 Mar 22. Plant Physiol. 2013. PMID: 23524861 Free PMC article.

10

Characterization of the cytokinin-responsive transcriptome in rice.

Raines T, Blakley IC, Tsai YC, Worthen JM, Franco-Zorrilla JM, Solano R, Schaller GE, Loraine AE, Kieber JJ. Raines T, et al. Among authors: loraine ae. BMC Plant Biol. 2016 Dec 8;16(1):260. doi: 10.1186/s12870-016-0932-z. BMC Plant Biol. 2016. PMID: 27931185 Free PMC article.

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