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Studying RNA-DNA interactome by Red-C identifies noncoding RNAs associated with various chromatin types and reveals transcription dynamics.
Gavrilov AA, Zharikova AA, Galitsyna AA, Luzhin AV, Rubanova NM, Golov AK, Petrova NV, Logacheva MD, Kantidze OL, Ulianov SV, Magnitov MD, Mironov AA, Razin SV. Gavrilov AA, et al. Among authors: luzhin av. Nucleic Acids Res. 2020 Jul 9;48(12):6699-6714. doi: 10.1093/nar/gkaa457. Nucleic Acids Res. 2020. PMID: 32479626 Free PMC article.
Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells.
Ulianov SV, Velichko AK, Magnitov MD, Luzhin AV, Golov AK, Ovsyannikova N, Kireev II, Gavrikov AS, Mishin AS, Garaev AK, Tyakht AV, Gavrilov AA, Kantidze OL, Razin SV. Ulianov SV, et al. Among authors: luzhin av. Nucleic Acids Res. 2021 Oct 11;49(18):10524-10541. doi: 10.1093/nar/gkab249. Nucleic Acids Res. 2021. PMID: 33836078 Free PMC article.
Nuclear lamina integrity is required for proper spatial organization of chromatin in Drosophila.
Ulianov SV, Doronin SA, Khrameeva EE, Kos PI, Luzhin AV, Starikov SS, Galitsyna AA, Nenasheva VV, Ilyin AA, Flyamer IM, Mikhaleva EA, Logacheva MD, Gelfand MS, Chertovich AV, Gavrilov AA, Razin SV, Shevelyov YY. Ulianov SV, et al. Among authors: luzhin av. Nat Commun. 2019 Mar 12;10(1):1176. doi: 10.1038/s41467-019-09185-y. Nat Commun. 2019. PMID: 30862957 Free PMC article.
The anti-cancer drugs curaxins target spatial genome organization.
Kantidze OL, Luzhin AV, Nizovtseva EV, Safina A, Valieva ME, Golov AK, Velichko AK, Lyubitelev AV, Feofanov AV, Gurova KV, Studitsky VM, Razin SV. Kantidze OL, et al. Among authors: luzhin av. Nat Commun. 2019 Mar 29;10(1):1441. doi: 10.1038/s41467-019-09500-7. Nat Commun. 2019. PMID: 30926878 Free PMC article.
LASCA: loop and significant contact annotation pipeline.
Luzhin AV, Golov AK, Gavrilov AA, Velichko AK, Ulianov SV, Razin SV, Kantidze OL. Luzhin AV, et al. Sci Rep. 2021 Mar 18;11(1):6361. doi: 10.1038/s41598-021-85970-4. Sci Rep. 2021. PMID: 33737718 Free PMC article.
16 results