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Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis.
Dalloul RA, Long JA, Zimin AV, Aslam L, Beal K, Blomberg Le Ann, Bouffard P, Burt DW, Crasta O, Crooijmans RP, Cooper K, Coulombe RA, De S, Delany ME, Dodgson JB, Dong JJ, Evans C, Frederickson KM, Flicek P, Florea L, Folkerts O, Groenen MA, Harkins TT, Herrero J, Hoffmann S, Megens HJ, Jiang A, de Jong P, Kaiser P, Kim H, Kim KW, Kim S, Langenberger D, Lee MK, Lee T, Mane S, Marcais G, Marz M, McElroy AP, Modise T, Nefedov M, Notredame C, Paton IR, Payne WS, Pertea G, Prickett D, Puiu D, Qioa D, Raineri E, Ruffier M, Salzberg SL, Schatz MC, Scheuring C, Schmidt CJ, Schroeder S, Searle SM, Smith EJ, Smith J, Sonstegard TS, Stadler PF, Tafer H, Tu ZJ, Van Tassell CP, Vilella AJ, Williams KP, Yorke JA, Zhang L, Zhang HB, Zhang X, Zhang Y, Reed KM. Dalloul RA, et al. Among authors: marz m. PLoS Biol. 2010 Sep 7;8(9):e1000475. doi: 10.1371/journal.pbio.1000475. PLoS Biol. 2010. PMID: 20838655 Free PMC article.
Invertebrate 7SK snRNAs.
Gruber AR, Koper-Emde D, Marz M, Tafer H, Bernhart S, Obernosterer G, Mosig A, Hofacker IL, Stadler PF, Benecke BJ. Gruber AR, et al. Among authors: marz m. J Mol Evol. 2008 Feb;66(2):107-15. doi: 10.1007/s00239-007-9052-6. Epub 2008 Jan 12. J Mol Evol. 2008. PMID: 18193315 Free PMC article.
U7 snRNAs: a computational survey.
Marz M, Mosig A, Stadler BM, Stadler PF. Marz M, et al. Genomics Proteomics Bioinformatics. 2007 Dec;5(3-4):187-95. doi: 10.1016/S1672-0229(08)60006-6. Genomics Proteomics Bioinformatics. 2007. PMID: 18267300 Free PMC article.
A survey of nematode SmY RNAs.
Jones TA, Otto W, Marz M, Eddy SR, Stadler PF. Jones TA, et al. Among authors: marz m. RNA Biol. 2009 Jan-Mar;6(1):5-8. doi: 10.4161/rna.6.1.7634. Epub 2009 Jan 26. RNA Biol. 2009. PMID: 19106623 Review.
Non-coding RNA annotation of the genome of Trichoplax adhaerens.
Hertel J, de Jong D, Marz M, Rose D, Tafer H, Tanzer A, Schierwater B, Stadler PF. Hertel J, et al. Among authors: marz m. Nucleic Acids Res. 2009 Apr;37(5):1602-15. doi: 10.1093/nar/gkn1084. Epub 2009 Jan 16. Nucleic Acids Res. 2009. PMID: 19151082 Free PMC article.
Evolution of 7SK RNA and its protein partners in metazoa.
Marz M, Donath A, Verstraete N, Nguyen VT, Stadler PF, Bensaude O. Marz M, et al. Mol Biol Evol. 2009 Dec;26(12):2821-30. doi: 10.1093/molbev/msp198. Epub 2009 Sep 4. Mol Biol Evol. 2009. PMID: 19734296
Bcheck: a wrapper tool for detecting RNase P RNA genes.
Yusuf D, Marz M, Stadler PF, Hofacker IL. Yusuf D, et al. Among authors: marz m. BMC Genomics. 2010 Jul 13;11:432. doi: 10.1186/1471-2164-11-432. BMC Genomics. 2010. PMID: 20626900 Free PMC article.
188 results