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2018 1
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Redefining false discoveries in cancer data analyses.
Najgebauer H, Perron U, Iorio F. Najgebauer H, et al. Nat Comput Sci. 2021 Jan;1(1):22-23. doi: 10.1038/s43588-020-00008-5. Nat Comput Sci. 2021. PMID: 38217149 No abstract available.
Integrated cross-study datasets of genetic dependencies in cancer.
Pacini C, Dempster JM, Boyle I, Gonçalves E, Najgebauer H, Karakoc E, van der Meer D, Barthorpe A, Lightfoot H, Jaaks P, McFarland JM, Garnett MJ, Tsherniak A, Iorio F. Pacini C, et al. Among authors: najgebauer h. Nat Commun. 2021 Mar 12;12(1):1661. doi: 10.1038/s41467-021-21898-7. Nat Commun. 2021. PMID: 33712601 Free PMC article.
CELLector: Genomics-Guided Selection of Cancer In Vitro Models.
Najgebauer H, Yang M, Francies HE, Pacini C, Stronach EA, Garnett MJ, Saez-Rodriguez J, Iorio F. Najgebauer H, et al. Cell Syst. 2020 May 20;10(5):424-432.e6. doi: 10.1016/j.cels.2020.04.007. Cell Syst. 2020. PMID: 32437684 Free article.
An integrated landscape of protein expression in human cancer.
Jarnuczak AF, Najgebauer H, Barzine M, Kundu DJ, Ghavidel F, Perez-Riverol Y, Papatheodorou I, Brazma A, Vizcaíno JA. Jarnuczak AF, et al. Among authors: najgebauer h. Sci Data. 2021 Apr 23;8(1):115. doi: 10.1038/s41597-021-00890-2. Sci Data. 2021. PMID: 33893311 Free PMC article.
Agreement between two large pan-cancer CRISPR-Cas9 gene dependency data sets.
Dempster JM, Pacini C, Pantel S, Behan FM, Green T, Krill-Burger J, Beaver CM, Younger ST, Zhivich V, Najgebauer H, Allen F, Gonçalves E, Shepherd R, Doench JG, Yusa K, Vazquez F, Parts L, Boehm JS, Golub TR, Hahn WC, Root DE, Garnett MJ, Tsherniak A, Iorio F. Dempster JM, et al. Among authors: najgebauer h. Nat Commun. 2019 Dec 20;10(1):5817. doi: 10.1038/s41467-019-13805-y. Nat Commun. 2019. PMID: 31862961 Free PMC article.
CardioClassifier: disease- and gene-specific computational decision support for clinical genome interpretation.
Whiffin N, Walsh R, Govind R, Edwards M, Ahmad M, Zhang X, Tayal U, Buchan R, Midwinter W, Wilk AE, Najgebauer H, Francis C, Wilkinson S, Monk T, Brett L, O'Regan DP, Prasad SK, Morris-Rosendahl DJ, Barton PJR, Edwards E, Ware JS, Cook SA. Whiffin N, et al. Among authors: najgebauer h. Genet Med. 2018 Oct;20(10):1246-1254. doi: 10.1038/gim.2017.258. Epub 2018 Jan 25. Genet Med. 2018. PMID: 29369293 Free PMC article.