Neal ML - Search Results

1

OMEX metadata specification (version 1.2).

Gennari JH, König M, Misirli G, Neal ML, Nickerson DP, Waltemath D. Gennari JH, et al. Among authors: neal ml. J Integr Bioinform. 2021 Oct 20;18(3):20210020. doi: 10.1515/jib-2021-0020. J Integr Bioinform. 2021. PMID: 34668356 Free PMC article.

2

Integration of multi-scale biosimulation models via light-weight semantics.

Gennari JH, Neal ML, Carlson BE, Cook DL. Gennari JH, et al. Among authors: neal ml. Pac Symp Biocomput. 2008:414-25. Pac Symp Biocomput. 2008. PMID: 18229704 Free PMC article.

3

Bridging biological ontologies and biosimulation: the ontology of physics for biology.

Cook DL, Mejino JL, Neal ML, Gennari JH. Cook DL, et al. Among authors: neal ml. AMIA Annu Symp Proc. 2008 Nov 6;2008:136-40. AMIA Annu Symp Proc. 2008. PMID: 18999003 Free PMC article.

4

Advances in semantic representation for multiscale biosimulation: a case study in merging models.

Neal ML, Gennari JH, Arts T, Cook DL. Neal ML, et al. Pac Symp Biocomput. 2009:304-15. Pac Symp Biocomput. 2009. PMID: 19209710 Free PMC article.

5

Composite annotations: requirements for mapping multiscale data and models to biomedical ontologies.

Cook DL, Mejino JL, Neal ML, Gennari JH. Cook DL, et al. Among authors: neal ml. Annu Int Conf IEEE Eng Med Biol Soc. 2009;2009:2791-4. doi: 10.1109/IEMBS.2009.5333830. Annu Int Conf IEEE Eng Med Biol Soc. 2009. PMID: 19964601 Free PMC article.

6

Multiple ontologies in action: composite annotations for biosimulation models.

Gennari JH, Neal ML, Galdzicki M, Cook DL. Gennari JH, et al. Among authors: neal ml. J Biomed Inform. 2011 Feb;44(1):146-54. doi: 10.1016/j.jbi.2010.06.007. Epub 2010 Jun 30. J Biomed Inform. 2011. PMID: 20601121 Free PMC article.

7

Representing physiological processes and their participants with PhysioMaps.

Cook DL, Neal ML, Hoehndorf R, Gkoutos GV, Gennari JH. Cook DL, et al. Among authors: neal ml. J Biomed Semantics. 2013 Apr 15;4 Suppl 1(Suppl 1):S2. doi: 10.1186/2041-1480-4-S1-S2. Epub 2013 Apr 15. J Biomed Semantics. 2013. PMID: 23735231 Free PMC article.

8

Ontology of physics for biology: representing physical dependencies as a basis for biological processes.

Cook DL, Neal ML, Bookstein FL, Gennari JH. Cook DL, et al. Among authors: neal ml. J Biomed Semantics. 2013 Dec 2;4(1):41. doi: 10.1186/2041-1480-4-41. J Biomed Semantics. 2013. PMID: 24295137 Free PMC article.

9

A reappraisal of how to build modular, reusable models of biological systems.

Neal ML, Cooling MT, Smith LP, Thompson CT, Sauro HM, Carlson BE, Cook DL, Gennari JH. Neal ML, et al. PLoS Comput Biol. 2014 Oct 2;10(10):e1003849. doi: 10.1371/journal.pcbi.1003849. eCollection 2014 Oct. PLoS Comput Biol. 2014. PMID: 25275523 Free PMC article. No abstract available.

10

Semantics-Based Composition of Integrated Cardiomyocyte Models Motivated by Real-World Use Cases.

Neal ML, Carlson BE, Thompson CT, James RC, Kim KG, Tran K, Crampin EJ, Cook DL, Gennari JH. Neal ML, et al. PLoS One. 2015 Dec 30;10(12):e0145621. doi: 10.1371/journal.pone.0145621. eCollection 2015. PLoS One. 2015. PMID: 26716837 Free PMC article.

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