P50 HG007735/HG/NHGRI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2014	4
2015	24
2016	26
2017	46
2018	36
2019	29
2020	24
2021	34
2022	21
2023	19
2024	6

1

Deep learning modeling of rare noncoding genetic variants in human motor neurons defines CCDC146 as a therapeutic target for ALS.

Zhang S, Moll T, Rubin-Sigler J, Tu S, Li S, Yuan E, Liu M, Butt A, Harvey C, Gornall S, Alhalthli E, Shaw A, Souza CDS, Ferraiuolo L, Hornstein E, Shelkovnikova T, van Dijk CH, Timpanaro IS, Kenna KP, Zeng J, Tsao PS, Shaw PJ, Ichida JK, Cooper-Knock J, Snyder MP. Zhang S, et al. medRxiv [Preprint]. 2024 Apr 1:2024.03.30.24305115. doi: 10.1101/2024.03.30.24305115. medRxiv. 2024. PMID: 38633814 Free PMC article. Preprint.

2

Prioritizing disease-related rare variants by integrating gene expression data.

Guo H, Urban AE, Wong WH. Guo H, et al. bioRxiv [Preprint]. 2024 Mar 21:2024.03.19.585836. doi: 10.1101/2024.03.19.585836. bioRxiv. 2024. PMID: 38562756 Free PMC article. Preprint.

3

Single-molecule chromatin configurations link transcription factor binding to expression in human cells.

Doughty BR, Hinks MM, Schaepe JM, Marinov GK, Thurm AR, Rios-Martinez C, Parks BE, Tan Y, Marklund E, Dubocanin D, Bintu L, Greenleaf WJ. Doughty BR, et al. bioRxiv [Preprint]. 2024 Feb 4:2024.02.02.578660. doi: 10.1101/2024.02.02.578660. bioRxiv. 2024. PMID: 38352517 Free PMC article. Preprint.

4

Compact RNA sensors for increasingly complex functions of multiple inputs.

Choe C, Andreasson JOL, Melaine F, Kladwang W, Wu MJ, Portela F, Wellington-Oguri R, Nicol JJ, Wayment-Steele HK, Gotrik M, Participants E, Khatri P, Greenleaf WJ, Das R. Choe C, et al. bioRxiv [Preprint]. 2024 Jan 16:2024.01.04.572289. doi: 10.1101/2024.01.04.572289. bioRxiv. 2024. PMID: 38260323 Free PMC article. Preprint.

5

Data integration and inference of gene regulation using single-cell temporal multimodal data with scTIE.

Lin Y, Wu TY, Chen X, Wan S, Chao B, Xin J, Yang JYH, Wong WH, Wang YXR. Lin Y, et al. Genome Res. 2024 Feb 7;34(1):119-133. doi: 10.1101/gr.277960.123. Genome Res. 2024. PMID: 38190633 Free PMC article.

6

The landscape of the histone-organized chromatin of Bdellovibrionota bacteria.

Marinov GK, Doughty B, Kundaje A, Greenleaf WJ. Marinov GK, et al. bioRxiv [Preprint]. 2023 Nov 2:2023.10.30.564843. doi: 10.1101/2023.10.30.564843. bioRxiv. 2023. PMID: 37961278 Free PMC article. Preprint.

7

The chromatin landscape of the euryarchaeon Haloferax volcanii.

Marinov GK, Bagdatli ST, Wu T, He C, Kundaje A, Greenleaf WJ. Marinov GK, et al. Genome Biol. 2023 Nov 6;24(1):253. doi: 10.1186/s13059-023-03095-5. Genome Biol. 2023. PMID: 37932847 Free PMC article.

8

Genome-wide distribution of 5-hydroxymethyluracil and chromatin accessibility in the Breviolum minutum genome.

Marinov GK, Chen X, Swaffer MP, Xiang T, Grossman AR, Greenleaf WJ. Marinov GK, et al. bioRxiv [Preprint]. 2023 Sep 22:2023.09.18.558303. doi: 10.1101/2023.09.18.558303. bioRxiv. 2023. PMID: 37781619 Free PMC article. Preprint.

9

Mutations in human DNA methyltransferase DNMT1 induce specific genome-wide epigenomic and transcriptomic changes in neurodevelopment.

Davis KN, Qu PP, Ma S, Lin L, Plastini M, Dahl N, Plazzi G, Pizza F, O'Hara R, Wong WH, Hallmayer J, Mignot E, Zhang X, Urban AE. Davis KN, et al. Hum Mol Genet. 2023 Oct 17;32(21):3105-3120. doi: 10.1093/hmg/ddad123. Hum Mol Genet. 2023. PMID: 37584462

10

EpiGePT: a Pretrained Transformer model for epigenomics.

Gao Z, Liu Q, Zeng W, Jiang R, Wong WH. Gao Z, et al. bioRxiv [Preprint]. 2024 Feb 3:2023.07.15.549134. doi: 10.1101/2023.07.15.549134. bioRxiv. 2024. PMID: 37502861 Free PMC article. Preprint.

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